Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00976 ATGGGTTTGCTTCGATTCTTCAAGAAATCCAAACTTTCTCATAAAAAAACCGTTCTTGACCATGTTTTTTTTGCTGCTGGGAAGTTCCGGTGGACTGAGATCGAGGCTTTTACTAATCATTTCTCCACCGTCGTCGGCTCCGGCGGCTTTAGCAAAGTGTATCTTGCTCGGATGACAGCCGGAACGGCGGCGGTTAAGATTTTGGGAGGTAGTGAGCGGCTCAATCGGATGTTCCGGCAGGAGTTGGACATTCTCCTTCAGCTCCGGCACCGAAATATTGTCGGTTTCATTGGCTATTGCGATGAAGGAGGTGAGAAGCTGAATTTAGGAGCTTTAGTATTCGAATATGTCCCAAATGGGAATTTACAAGAGAAGCTCCACAGCCGACCGGCGGCGGCGGCGGCGGTTCTGCCATGGGAAATCCGGCTGACCATAGCCTTTCAATTAGCCCAAGCAATCGAATATCTCCACGAGAAATGCAGACTCCAAATCGTTCACAGCGATATAAAATCTTCAAACATTTTACTCGACGAACGATTCAATTGCAAATTGTGCGATTTCGGCTCTGCAAAAATGGGATTCTCGTCGGCGGTGGCGAATCAGTCGTCGTCGCCGCCGAGCCCTTTCAGAGCAAAGCAATTGATGATGGGATCCCCTGGTTACACAGATCCCCAATACTTACGAACCGGAATCGCTTCAAAAAAGAACGACATTTACAGTTTCGGCGTCGTTCTTTTAGAGCTAATCACCGGAAAAGAGGCATTCTGTTCGGAAAAGGGTCAGATTTTAACTTCAATTATACCGCCGAAGGTGCGCCACGGTGGAGGAATTACACCGTCGGCAGTGGTGGAGCTAGTGGATCCACGGCTTCGGGGGAATTTCGATGGGGGAGAAGCGGGAGCCTTGCTCTCAATTGCGACGGCCTGCATATCGCAGCCGCCGGCGCCCAGGCCGACGATCGGTGGGGTACTGCAGATGATGAGGGAGCGGATCGGGAAGATGAGCGGAGACACGTGGCAATAA 1023 50.73 MGLLRFFKKSKLSHKKTVLDHVFFAAGKFRWTEIEAFTNHFSTVVGSGGFSKVYLARMTAGTAAVKILGGSERLNRMFRQELDILLQLRHRNIVGFIGYCDEGGEKLNLGALVFEYVPNGNLQEKLHSRPAAAAAVLPWEIRLTIAFQLAQAIEYLHEKCRLQIVHSDIKSSNILLDERFNCKLCDFGSAKMGFSSAVANQSSSPPSPFRAKQLMMGSPGYTDPQYLRTGIASKKNDIYSFGVVLLELITGKEAFCSEKGQILTSIIPPKVRHGGGITPSAVVELVDPRLRGNFDGGEAGALLSIATACISQPPAPRPTIGGVLQMMRERIGKMSGDTWQ 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6020389 6021932 + CmoCh02G009760.1 Cmo02g00976 376573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00976 340 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 25 336 - -
Cmo02g00976 340 ProSiteProfiles Protein kinase domain profile. 39 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00976 340 PANTHER BNAA02G22020D PROTEIN 25 336 - -
Cmo02g00976 340 SMART serkin_6 39 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00976 340 Gene3D Phosphorylase Kinase; domain 1 5 116 - -
Cmo02g00976 340 SUPERFAMILY Protein kinase-like (PK-like) 26 327 IPR011009 -
Cmo02g00976 340 Pfam Protein kinase domain 42 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00976 340 Gene3D Transferase(Phosphotransferase) domain 1 117 336 - -
Cmo02g00976 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Cmo02g00976 340 ProSitePatterns Protein kinases ATP-binding region signature. 45 66 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00976 Cmo15g01410 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00976 Cmo-Chr2:6020389 Cmo01g00086 Cmo-Chr1:396355 1.52E-55 dispersed
Cmo15g01410 Cmo-Chr15:9612513 Cmo02g00976 Cmo-Chr2:6020389 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74121 PF00069 Pkinase 6.60E-39 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00976 - - cmax:111468884 519.235