Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00712 ATGACGTCGGGGACGAGGCTACCAACATGGAGGGAGCGGGAGAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATAGCGGCTAAGATCTTTGCTGGACTCAGGATGTATGGCAACTACAAGCTTCCCAAGCATTGCGATAACAATGAGGTGCTTAAAGCTCTCTGCAACGAGGCAGGATGGACCGTCGAACCTGATGGTACCACTTATCGTAAGGGATGCAAACCAATTGAACGTATGGATGTGGTTGGCGGATCGGCATCCGCAAGTCTGTACGCATCTCACCAACCAAGTCCTTGTGCTTCATTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGCCCAGCATCATCCTCATATGTCGCTAATATGAATGCTGATGGCAATTCACTAATCCCATGGCTCAAAAACCTTTCATCTTCATCATCTTCGGCATCCTCATCTAAACTTCCCAATCACTATATTCATGGAGGTTCCATCAGTGCACCTGTTACTCCTCCTCTGAGTTCCCCAACTGCTCGAACACCCCGACTGAGAGCCGACTGGGAGGACCAGTCTGTACTTCCGGGATGGAGTACACACTATAATTCCTCCCTGCCATCTTCTACTCCTCCAAGTCCTGGACGTCAGATTGTTCCCAATCCAGAATGGTTTGCTGGCCTTAGGATTCCTCAGGGTGGGCCCAATTCTCCAACATTTAGTCTTGTTTCTACTAACCCATTTGGTTTCAAGGAAGCAGCAATGAATGGTGGAGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCCCCTGCCATTGCAGCAGGCTCCGATCACACCGCAGATATTCCAATGTCAGAAGTGATCTCTGATGAGTTCGCATTTGGAAGCAATGCCGCAGGAATTGTGAAGGCATGGGAAGGAGAACGGATTCATGAAGAATGTGGTTCAGATGACCTAGAGCTGACTCTTGGGAACTCAAGGACCAGATTTAAGTTATAA 990 49.09 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSASASLYASHQPSPCASFNPSPGSSSFPSPASSSYVANMNADGNSLIPWLKNLSSSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLRADWEDQSVLPGWSTHYNSSLPSSTPPSPGRQIVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMNGGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKAWEGERIHEECGSDDLELTLGNSRTRFKL 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3530555 3533287 - CmoCh04G007120.1 Cmo04g00712 379687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00712 329 MobiDBLite consensus disorder prediction 98 117 - -
Cmo04g00712 329 MobiDBLite consensus disorder prediction 158 180 - -
Cmo04g00712 329 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Cmo04g00712 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 328 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cmo04g00712 329 MobiDBLite consensus disorder prediction 1 20 - -
Cmo04g00712 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 328 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00712 Cmo16g00479 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00712 Cmo-Chr4:3530555 Cmo13g00609 Cmo-Chr13:6674594 1.85E-135 dispersed
Cmo16g00557 Cmo-Chr16:2713632 Cmo04g00712 Cmo-Chr4:3530555 2.97E-16 wgd
Cmo16g00463 Cmo-Chr16:2222424 Cmo04g00712 Cmo-Chr4:3530555 3.31E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9552 PF05687 BES1_N 2.20E-65 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00712 - - csv:101210002 576.244