Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g00282 | ATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTCTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATTTTCATGAACAGTTTATGCGGTTACCTCTCACTTCTCATAATTGTAACGTGGTGCTCTGGATCTCAAGCTCTGTATCACGTAATGATCTATATAGGCGAAAACCAGCTTTTTCCAGGACAGAAGTTCCTTCAGCTTATACATTCCGTAGAGTTCGTACCTGGTGCAGTTTCTAAAACAGCATCCTTTCTACGTCTATGGGCCCTCAGGTCCAAATTTCTTTCACTCAGCCAAGCGCATTCGGAGTTCTTGAGTGTATTTTACGACAAGGTTCTACTCCTAGCTTGGGGGTTCAATAGTTTGATCATCCGAATGGTGTAG | 408 | 40.93 | MNRGIILSYFKAKFFGENINIWYQFVPQMIFMNSLCGYLSLLIIVTWCSGSQALYHVMIYIGENQLFPGQKFLQLIHSVEFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKVLLLAWGFNSLIIRMV | 135 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1227643 | 1229441 | - | CmoCh05G002820.1 | Cmo05g00282 | 382417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g00282 | 135 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT A | 74 | 135 | - | - | |
Cmo05g00282 | 135 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT A | 1 | 76 | - | - | |
Cmo05g00282 | 135 | PANTHER | VACUOLAR PROTON ATPASES | 74 | 135 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cmo05g00282 | 135 | PANTHER | VACUOLAR PROTON ATPASES | 1 | 76 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cmo05g00282 | 135 | Pfam | V-type ATPase 116kDa subunit family | 74 | 125 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cmo05g00282 | 135 | Pfam | V-type ATPase 116kDa subunit family | 1 | 74 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g00282 | Cmo12g00383 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00282 | Cmo-Chr5:1227643 | Cmo20g00495 | Cmo-Chr20:2343070 | 5.45E-18 | dispersed | |
Cmo12g00383 | Cmo-Chr12:2370897 | Cmo05g00282 | Cmo-Chr5:1227643 | 3.94E-38 | wgd | |
Cmo19g00696 | Cmo-Chr19:7351871 | Cmo05g00282 | Cmo-Chr5:1227643 | 5.73E-16 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g00282 | K02154 | - | csv:101209817 | 129.028 |