Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo05g00282 ATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTCTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATTTTCATGAACAGTTTATGCGGTTACCTCTCACTTCTCATAATTGTAACGTGGTGCTCTGGATCTCAAGCTCTGTATCACGTAATGATCTATATAGGCGAAAACCAGCTTTTTCCAGGACAGAAGTTCCTTCAGCTTATACATTCCGTAGAGTTCGTACCTGGTGCAGTTTCTAAAACAGCATCCTTTCTACGTCTATGGGCCCTCAGGTCCAAATTTCTTTCACTCAGCCAAGCGCATTCGGAGTTCTTGAGTGTATTTTACGACAAGGTTCTACTCCTAGCTTGGGGGTTCAATAGTTTGATCATCCGAATGGTGTAG 408 40.93 MNRGIILSYFKAKFFGENINIWYQFVPQMIFMNSLCGYLSLLIIVTWCSGSQALYHVMIYIGENQLFPGQKFLQLIHSVEFVPGAVSKTASFLRLWALRSKFLSLSQAHSEFLSVFYDKVLLLAWGFNSLIIRMV 135
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 1227643 1229441 - CmoCh05G002820.1 Cmo05g00282 382417
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo05g00282 135 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 74 135 - -
Cmo05g00282 135 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 76 - -
Cmo05g00282 135 PANTHER VACUOLAR PROTON ATPASES 74 135 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo05g00282 135 PANTHER VACUOLAR PROTON ATPASES 1 76 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo05g00282 135 Pfam V-type ATPase 116kDa subunit family 74 125 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo05g00282 135 Pfam V-type ATPase 116kDa subunit family 1 74 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo05g00282 Cmo12g00383 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00282 Cmo-Chr5:1227643 Cmo20g00495 Cmo-Chr20:2343070 5.45E-18 dispersed
Cmo12g00383 Cmo-Chr12:2370897 Cmo05g00282 Cmo-Chr5:1227643 3.94E-38 wgd
Cmo19g00696 Cmo-Chr19:7351871 Cmo05g00282 Cmo-Chr5:1227643 5.73E-16 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo05g00282 K02154 - csv:101209817 129.028