Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo05g01102 | ATGGCGTCGAGGAATCGGACTTTGATTTTTAGGAAATACAGGGACGCGTTGAGGAGTGTGAGGGTTCCTACCGGCTCTTCGCCTGCTTCTGCATCTCCATCGACTAGCTCTGGCACTGGTGGACCGGTGATTGAATTGGTTAGCTCGTCGTTGTTGCATCCGAATCGGTCGTACGCTCCCTTAAGTACTGAGGATCCGGGTAATTCAAGTAAGGGTGCTCTTACTGTGGGTCTACCTCCGGCTTGGGTGGATGTATCCGAAGAAATAGCTGCAAATGTGCAGCGAGCACGAGTAAAGATGATGGAGTTAGCTAAAGCTCATGCAAAAGCTTTAATGCCTTCATTTGGAGATGATAAAGAAGATCAACGGTTAATTGAATCTCTCACGCAAGACATAACTAACTTAATCAAGAAATCGGAGAAGGGGCTCAAGAGATTTTCCGTAGCTGGACCTTCGGAAGATTCCAATATCAGAAAAAATGTTCAGCGATCTCTTGCCACTGACCTTCAGAACCTCTCCATGGAGCTTCGCAAGAAACAATCAACTTATTTAAAGCGCCTACGGCAGCAAAAAGAGGAAGGTCAAGATGGGATTGACATAGAGATGAATCTAAATGGAAACAGGTCGAGAATGGAGGAGGACGATGATTTAGAAGACATGGTATTTAACGAGCATCAGATGGCTAAGGTGCGAAAGACTGAAGCATTCACTGCAGAAAGAGAGAGAGAGATCCAACAAGTAGTAGAATCCGTGAACGAGCTCGCTCAGATCATGAAGGATCTATCAGTACTAGTCATAGACCAGGTTAGAGAAGGTGCCCATCCTACGACCTGCGGAGAGAACACAGAAACAAGGGGGGATGGTAATGTGCGCGTCCGTGCTCATTATCATGTGCTTCGTCATGTTGGTTCTCTTAATCCTTAA | 924 | 46.1 | MASRNRTLIFRKYRDALRSVRVPTGSSPASASPSTSSGTGGPVIELVSSSLLHPNRSYAPLSTEDPGNSSKGALTVGLPPAWVDVSEEIAANVQRARVKMMELAKAHAKALMPSFGDDKEDQRLIESLTQDITNLIKKSEKGLKRFSVAGPSEDSNIRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEEGQDGIDIEMNLNGNRSRMEEDDDLEDMVFNEHQMAKVRKTEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQVREGAHPTTCGENTETRGDGNVRVRAHYHVLRHVGSLNP | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8787283 | 8791425 | - | CmoCh05G011020.1 | Cmo05g01102 | 383237 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo05g01102 | 307 | MobiDBLite | consensus disorder prediction | 21 | 44 | - | - | |
Cmo05g01102 | 307 | Gene3D | - | 79 | 280 | - | - | |
Cmo05g01102 | 307 | SUPERFAMILY | t-snare proteins | 77 | 268 | IPR010989 | GO:0016020|GO:0016192 | |
Cmo05g01102 | 307 | SMART | SynN_4 | 73 | 188 | IPR006011 | GO:0016020 | |
Cmo05g01102 | 307 | MobiDBLite | consensus disorder prediction | 23 | 44 | - | - | |
Cmo05g01102 | 307 | PANTHER | SYNTAXIN-43-LIKE | 1 | 268 | - | - | |
Cmo05g01102 | 307 | PANTHER | SYNTAXIN | 1 | 268 | IPR045242 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g01102 | Cmo12g01056 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g01102 | Cmo-Chr5:8787283 | Cmo17g01031 | Cmo-Chr17:8784234 | 1.41E-100 | dispersed | |
Cmo12g01056 | Cmo-Chr12:9759088 | Cmo05g01102 | Cmo-Chr5:8787283 | 3.98E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo05g01102 | K08489 | - | csv:101207998 | 464.151 |