Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo06g01337 ATGGATCCATTGGAGGACCAGAGCAGTTCGGATTTTCTTGATTACTCGTTGTTCGCCGACGCCGACAACATTGTTAGCCCTTCGCTCGGTCCTCTATGGCTGCCTAATGATTTCAGGGATGGCGGTGCGGATACGGGTGTTTCAGCCGGGCGTGTTGAATCTGAAGAAACCGATTGTTTGCGGAAGAGGGTGCGAGATGAGCCGTGCACTGGACCGACTTCTAAAGCTTGTCGCGAGAGGTTGCGGAGAGGGAGATTAAATGATAGGCAAGCATTTTTTTTGTCATCCAACTCTTTTGCATACCTGCTTCTTTTCATTCTTTTGTTTGATGATGATGATAATATTGGGAGGACAAGTCTAATGGTGTTTCTAGATTTGAGCCATGCTTTAGAACCCGATAGACCTGCCAAAACGAACAAGCCTGCCATACTTGATGATGCCATTAGAGTGTTGAATCAACTCAAGACTGAAGCTGAAGAGCTCAAACAAACTAACGAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCAGAGAAAAATGATCTTCGGAAGGAGAAAACAATTTTGAAGGAAGACAAAGATAGAATCGAGCAACAGTTGAAATCTATGGCCATTCCACCTCCAGGGCTTATCCCAGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGATACCAATGTGGCCATATCTTCCTCCATCAGTATGTGATACTTCTCAAGATCATGAGCTCAGGCCTCCTGCTGCTTAG 777 45.56 MDPLEDQSSSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLSSNSFAYLLLFILLFDDDDNIGRTSLMVFLDLSHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKDRIEQQLKSMAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9943050 9946084 + CmoCh06G013370.1 Cmo06g01337 384899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo06g01337 258 PANTHER TRANSCRIPTION FACTOR BHLH104 2 89 - -
Cmo06g01337 258 PANTHER TRANSCRIPTION FACTOR BHLH104 123 258 - -
Cmo06g01337 258 Gene3D - 144 205 - -
Cmo06g01337 258 PANTHER BHLH TRANSCRIPTION FACTOR 2 89 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Cmo06g01337 258 Coils Coil 144 199 - -
Cmo06g01337 258 PANTHER BHLH TRANSCRIPTION FACTOR 123 258 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01337 Cmo14g01842 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01337 Cmo-Chr6:9943050 Cmo16g00916 Cmo-Chr16:5522341 1.99E-46 dispersed
Cmo14g01842 Cmo-Chr14:13948716 Cmo06g01337 Cmo-Chr6:9943050 9.11E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo06g01337 - - csv:101210812 325.094