Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00285 ATGGAGATGGGCAGTTCGAGTTTGAGAAGGATTTTCTACCTCTCCTTCGTTATTGCACAATTGATGCTTACCACAACTTCACAGCGCGACTTTTTTCTGTCCAAATGTTCAGAGAACGCCAACTACACCAACAACAGCCCTTTCAAGAAAAATCTCGAAAACGCACTCGCCTCAATCACCTCCAACTCCAACACCGACACCCGTGTCGACTACGGTTTCTATAATGCCACCTTCGGTGAAGCTCCCGACACGGCCAACGCCAAGGCTCTTTGTCGTAAAGGTGTTCCCTTGGAAGACTGCAGATCATGCGTGAATGACTCAGCCCGCAGGATTGTACAAAACTGTCCAAACCAGAAGGAAGGTGCGGGATGGTACCATCATTGCCAAATACTTTACTCAAACAACTCTGTTCACGGTGAGATAACCATCAATTCCGCCTCGCAAATCGCTTTCAACACTGCTCAGGCCCCGGATGCCAACAGTTTCAACGAGGAACGGAGAGAGTTGTTAGATCGACTCCGGGAGGAGGCTGCGTTAGGGAGTTCAATTCGCAAGTCTGCCGGCGGAGATGTCAAACTTGCAAATCCGAATACGTATACCATATATGGCCTCGTTGATTGTTTTCCCGACATGTCGTACTTCGATTGTGATGTCTGCCTCAGTCGGCTTCAAAGTAATCTTCCCAGTTGTTGTAACGGCAGCATAGGGGCGAGATTAATTGTGACAAGTTGTCAAATAAACTATGAAATCCACCCTCTCTATGCAGCACTTCTCTCTCCTCCTCTGCCTCCGCCCTCATCTCCTAATCTCCTCCCTCCATCTTCGACTTCGACACCGGAAAGTAATGGGTATACTGCTAGAACTGTTATCATTGTAGCGGTGTCCATCGCTTCAGCCATCATTCTCATTGTTGGTATTTGCATCGTTGCGAGATTGAGGAAGCGAAAGCACAAAAGATCATTACAAAGACTTGAAACTGTTACTCATGGAGACGCCACCGATGAAATTAGCAGTGTGGAGACGATTCAATTTGATTTTGACACAATTAAAGAGGCAACTGATGACTTCTCAGACGAAAACAAGCTGGGACAGGGTGGATTCGGAGCTGTTTACAGGGGTAAGCTTCCTAATGGACAGCATATTGCGGTGAAGCGGCTTGCGAACAATTCACAACAAGGCGACGTTGAATTCAAAAATGAAGTCCTTTTGGTAGTGAAGCTTCAGCACCGGAACTTGGTTAGGCTGCTGGGTTTCTGCTTGCAAGGAATCGAAAGACTTCTCATATATGAGTTTGTACCAAATGGCAGCCTTGACCACTTCATATTTGATTTGGGAAAGCGGGCACTGTTAAATTGGGAAAGACGATACAAAATTATAAATGGCATTGCACGAGGACTTCTTTATCTTCACGAAGATTCTCGTCTTCGAATCATACATCGTGATCTCAAAGCTAGCAATATTTTGTTGGATATAGAAATGAATCCAAAGATTGCTGATTTTGGTATGGCAAGATTGTTCGACGTAGATGAGACTCAAGGCAACACAAGTAGAGTTGTGGGAACTTACGGTTATATGGCTCCAGAGTACGTAATCCACGGACAATTTTCAGTAAAATCAGATGTCTTTAGCTTCGGTATTTTAGTTCTTGAAATTTTAAGCGGTCAAAAAGGCAATTGTTTTCGCAACGGAGAAAACATCGAAGACCTTTCCAGCTTTGCATGGAAAAATTGGAGAGAAGGAACAACGACAAATATAATAGATTCAACACTTAGTGTTGGTTCAAGGATCGAAATGATAAGATGCATTCATATCGGACTATTGTGTGTTCAAGAAAACGTAGGAAATCGACCAACAATGGCTTCAGTGGCGATGATGCTAAGTAGTTCCTCACTCACTCTTCCAGTACCCTCTAGACCTGGATTCTTCATGCATAGTATCACCGGTGAATCCAACACAATGGTAAAGTCAGATGGGGGTTCTCATTCTGAAGCCAGATCTCTTCAAAATTCGGATAATGATGCTTCAATTTCAGAGCTTTTTCCTCGTTAG 2049 44.17 MEMGSSSLRRIFYLSFVIAQLMLTTTSQRDFFLSKCSENANYTNNSPFKKNLENALASITSNSNTDTRVDYGFYNATFGEAPDTANAKALCRKGVPLEDCRSCVNDSARRIVQNCPNQKEGAGWYHHCQILYSNNSVHGEITINSASQIAFNTAQAPDANSFNEERRELLDRLREEAALGSSIRKSAGGDVKLANPNTYTIYGLVDCFPDMSYFDCDVCLSRLQSNLPSCCNGSIGARLIVTSCQINYEIHPLYAALLSPPLPPPSSPNLLPPSSTSTPESNGYTARTVIIVAVSIASAIILIVGICIVARLRKRKHKRSLQRLETVTHGDATDEISSVETIQFDFDTIKEATDDFSDENKLGQGGFGAVYRGKLPNGQHIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQGIERLLIYEFVPNGSLDHFIFDLGKRALLNWERRYKIINGIARGLLYLHEDSRLRIIHRDLKASNILLDIEMNPKIADFGMARLFDVDETQGNTSRVVGTYGYMAPEYVIHGQFSVKSDVFSFGILVLEILSGQKGNCFRNGENIEDLSSFAWKNWREGTTTNIIDSTLSVGSRIEMIRCIHIGLLCVQENVGNRPTMASVAMMLSSSSLTLPVPSRPGFFMHSITGESNTMVKSDGGSHSEARSLQNSDNDASISELFPR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1395425 1398341 - CmoCh07G002850.1 Cmo07g00285 385593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00285 682 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00285 682 ProSiteProfiles Gnk2-homologous domain profile. 30 137 IPR002902 -
Cmo07g00285 682 Gene3D - 29 136 IPR038408 -
Cmo07g00285 682 Gene3D - 144 252 IPR038408 -
Cmo07g00285 682 SUPERFAMILY Protein kinase-like (PK-like) 337 626 IPR011009 -
Cmo07g00285 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Cmo07g00285 682 CDD STKc_IRAK 362 626 - -
Cmo07g00285 682 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 667 - -
Cmo07g00285 682 MobiDBLite consensus disorder prediction 652 682 - -
Cmo07g00285 682 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Cmo07g00285 682 SMART serkin_6 356 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00285 682 Gene3D Transferase(Phosphotransferase) domain 1 432 632 - -
Cmo07g00285 682 MobiDBLite consensus disorder prediction 652 676 - -
Cmo07g00285 682 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Cmo07g00285 682 Gene3D Phosphorylase Kinase; domain 1 315 431 - -
Cmo07g00285 682 Pfam Proline-rich membrane anchor 1 242 319 - -
Cmo07g00285 682 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Cmo07g00285 682 Pfam Salt stress response/antifungal 36 134 IPR002902 -
Cmo07g00285 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 667 - -
Cmo07g00285 682 Pfam Protein tyrosine and serine/threonine kinase 359 622 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00285 Cmo13g00794 CCT
Cmo03g00536 Cmo07g00285 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00534 Cmo-Chr3:5436193 Cmo07g00285 Cmo-Chr7:1395425 0 dispersed
Cmo03g00542 Cmo-Chr3:5460624 Cmo07g00285 Cmo-Chr7:1395425 0 dispersed
Cmo05g00039 Cmo-Chr5:147272 Cmo07g00285 Cmo-Chr7:1395425 4.95E-100 dispersed
Cmo07g00285 Cmo-Chr7:1395425 Cmo13g00729 Cmo-Chr13:7267058 0 dispersed
Cmo18g00298 Cmo-Chr18:1936525 Cmo07g00285 Cmo-Chr7:1395425 3.35E-144 dispersed
Cmo07g00285 Cmo-Chr7:1395425 Cmo07g00286 Cmo-Chr7:1398653 0 tandem
Cmo13g00735 Cmo-Chr13:7294508 Cmo07g00285 Cmo-Chr7:1395425 1.22E-16 wgd
Cmo18g00297 Cmo-Chr18:1926313 Cmo07g00285 Cmo-Chr7:1395425 5.54E-142 wgd
Cmo03g00536 Cmo-Chr3:5440855 Cmo07g00285 Cmo-Chr7:1395425 1.36E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74450 PF07714 PK_Tyr_Ser-Thr 8.50E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00285 - - cmo:103484586 953.355