Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00462 ATGCATCCCGTATTTCGAGCCGAGAAACCAAACGGAGCTATTCACTTGAAGGCTGTTGAAATGAATGCAATTGCAGTGCCAAGTTCCAGTTGCTATGTTTTTGACAATTCTAGTCACATCATTGACTTTGTATCCTACTCAGAATGCTGGATTGGACACCCATTTGAATATGAGGAGAAGGGTTCTGACTTGGTGGTTCAGTTTTGCAAAGATGTGGAAAGTAGATCACAAGTGGGATATGTAGATTTTGGTCGATTTGATAAGTTCAACTACTTTGTATCTGGTTCAGGACATGCCGACTTTGTTCAAGATTATTACAATGGCGACCTGACTTCTTGTGAGCATAGTTATGACAAATTGGGGAGGACTGCGCAGGTAAATGTTATGTGTAGAGGTTGTTTAAATGGACAATGTAAAGTGCTCTTGGAATATGTTGATACTAGTGATGAACGCATTCATCATCTTATTATAGGTGGTCTGGGATGCATCTGCAATATCACTCATGAGTCCAGTTGCAGGTCTTGCACAGTTATTGTCGATCTTGCCATCCCTTGTGAGATACAAGGCCCACGTGTTTTCAAAGGGTTTACTGTTGGTTTTCACCCTCGATCTTGGGAAATTGTTTACAATGGTTTGACTCAATTAGGCTATGAGAAGCCACACCGTGCATTCAGCTTTAGCACGGAGCAGACTAGTCTGGTTCTTTATATGACTGCAATTGCATCACTTTCCTCTTTTGTACAGAAACCGATTATTCAGGTTTTTCCAGAAAATGGACTAGAGGTGAAAGTATCGGGCTCAGGGGCAACTGGGAGCTACCCTACAACTTTGTCACCCTCGATGTTGATGATTGACTGGAGATGTGACATTGCCAGGGACGTTCCATATGCTGTTAACGTCACAATCCCTGTGGCTGATTATGAACCAATTAATTTTTTTCTTGCCAAAATGTGTGGCGTGAAAGCTAAACCTAAGTCTACCTTTGAGTTTCATATTTTGCAGAAAAAAGGCAAGACGTACAAGGAGATTACATGCAAGGATGGGCCACATTTGGAATACTCTCTTGCTTTCTGGATAACTTTCTGCAAAGTAACTGGTCTCCTGCTGCAACCTCTTGCTCTATTTGATCAACTAGAAAATAAGTCATTCATAGTCGGATCGTCGCTATTTTGCTGTGGAGGATTTGTTTACAAGACCCAAGTGCAAGGCCAGCGTGGAATTGATGCATTGCCGGGCATGACATTACTATCCGCCTGCTTGGAAACTGTGAGTGGTGCAGGACATAGCTACCCGAGAGCGGAAGGCTTCAACGATGCAATTGTCATCTTTAGAGAGTTCACTAAAGGAATTCGGCTGTTTGCCATTGGATCAAGGACTATAGGCAGACGCAAAAGAGCTTTAGAAATGAAAAGATTCCAAACCCAAATAGGAACCTTAGAGGGTTTGAGGGATGAGATCAAATCTGCATTGGAGAAAGAATGGCCACAAACAGTTTGGTGCGCTGATATCTTGGCTTTAGCTGCAAGAGATTCCACTGTCATTGCGGGTGGACCCTCTTGGGAGGTTCCATTGGGAAGGAAGGACTCCGAGAACTGCGAAACTTTCGCTCACAACTCTGCCTCTGATTCTCCGTCTACTTGCAATTTAAATCTTCTAGGGTTGGAAAGATTGACATCGTTTTCATTGCTGAATCACCGGAATTACACTGTTGCTTCACCGGAATCAAAACCAGCCCCTTCAGAGAGAGTTACGGCCATTGTGGATGAGATCTCCGGTCTCACGCTACTTGAGGTTGCAGACCTTACGGAGGTTCTTCGAGAAAAGTTGGATGTGAAGGATATGCCGGTAATGGCGGTGATGATGCCGGGGATGGGGTTTGGCGGCTTGCAAAACGCTGGCAAGGGTGGTTCTGGGGCGAAAGGCGGTGAAGAGAAGAAGGCGGAGAAGACAGCGTTTGATGTGAAGCTTGAAGCTTTTGATGCTGCGTCGAAGATCAAGGTCATTAAGGAAGTGCGAATGTTTACGAATTTGGGATTGAAGGAAGCTAAGGATTTGGTGGAGAAGGCGCCAACGCTTCTAAAGAAGGGGGTGACGAAAGAGGAAGCTGATACGATTATTGCCAAGATGAAGGAGGTTGGCGCCAAAGTTTCAATGGAGTGA 2160 44.54 MHPVFRAEKPNGAIHLKAVEMNAIAVPSSSCYVFDNSSHIIDFVSYSECWIGHPFEYEEKGSDLVVQFCKDVESRSQVGYVDFGRFDKFNYFVSGSGHADFVQDYYNGDLTSCEHSYDKLGRTAQVNVMCRGCLNGQCKVLLEYVDTSDERIHHLIIGGLGCICNITHESSCRSCTVIVDLAIPCEIQGPRVFKGFTVGFHPRSWEIVYNGLTQLGYEKPHRAFSFSTEQTSLVLYMTAIASLSSFVQKPIIQVFPENGLEVKVSGSGATGSYPTTLSPSMLMIDWRCDIARDVPYAVNVTIPVADYEPINFFLAKMCGVKAKPKSTFEFHILQKKGKTYKEITCKDGPHLEYSLAFWITFCKVTGLLLQPLALFDQLENKSFIVGSSLFCCGGFVYKTQVQGQRGIDALPGMTLLSACLETVSGAGHSYPRAEGFNDAIVIFREFTKGIRLFAIGSRTIGRRKRALEMKRFQTQIGTLEGLRDEIKSALEKEWPQTVWCADILALAARDSTVIAGGPSWEVPLGRKDSENCETFAHNSASDSPSTCNLNLLGLERLTSFSLLNHRNYTVASPESKPAPSERVTAIVDEISGLTLLEVADLTEVLREKLDVKDMPVMAVMMPGMGFGGLQNAGKGGSGAKGGEEKKAEKTAFDVKLEAFDAASKIKVIKEVRMFTNLGLKEAKDLVEKAPTLLKKGVTKEEADTIIAKMKEVGAKVSME 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2107826 2116953 - CmoCh07G004620.1 Cmo07g00462 385770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00462 719 Gene3D - 465 551 - -
Cmo07g00462 719 SUPERFAMILY Heme-dependent peroxidases 481 538 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 584 654 IPR036235 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 Pfam Peroxidase 482 593 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 Pfam Ribosomal protein L7/L12 C-terminal domain 652 718 IPR013823 GO:0003735|GO:0006412
Cmo07g00462 719 TIGRFAM L12: ribosomal protein bL12 584 718 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 Gene3D Single helix bin 582 648 IPR036235 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 SUPERFAMILY ClpS-like 648 718 IPR014719 -
Cmo07g00462 719 CDD Ribosomal_L7_L12 581 718 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 PRINTS Plant peroxidase signature 516 531 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 PRINTS Plant peroxidase signature 497 507 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 PANTHER G-PROTEIN COUPLED RECEPTOR 14 325 - -
Cmo07g00462 719 PANTHER G-PROTEIN COUPLED RECEPTOR 383 441 - -
Cmo07g00462 719 Hamap 50S ribosomal protein L7/L12 [rplL]. 580 719 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 Gene3D - 649 718 IPR014719 -
Cmo07g00462 719 ProSiteProfiles Plant heme peroxidase family profile. 484 529 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 Pfam Ribosomal protein L7/L12 dimerisation domain 584 623 IPR008932 GO:0003735|GO:0005840|GO:0006412
Cmo07g00462 719 PRINTS Haem peroxidase superfamily signature 498 515 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g00462 719 PRINTS Haem peroxidase superfamily signature 516 528 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00743 Cmo07g00462 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02831 Cmo-Chr4:20258715 Cmo07g00462 Cmo-Chr7:2107826 5.23E-17 dispersed
Cmo07g00462 Cmo-Chr7:2107826 Cmo13g00874 Cmo-Chr13:7951170 6.08E-42 dispersed
Cmo15g00354 Cmo-Chr15:1659121 Cmo07g00462 Cmo-Chr7:2107826 1.33E-19 dispersed
Cmo01g00474 Cmo-Chr1:2264307 Cmo07g00462 Cmo-Chr7:2107826 2.94E-33 transposed
Cmo07g00656 Cmo-Chr7:2952356 Cmo07g00462 Cmo-Chr7:2107826 2.52E-31 transposed
Cmo16g00691 Cmo-Chr16:3419492 Cmo07g00462 Cmo-Chr7:2107826 5.32E-19 wgd
Cmo03g00742 Cmo-Chr3:6288117 Cmo07g00462 Cmo-Chr7:2107826 1.35E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00462 - - csv:101207936 564.688