Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00373 ATGGCAGTCGGTGTGAGAGTTGCCGGGAGTATTATCGGCCGCGATCGAGTTCTCACGGCGGTTATTGCCGGAGCGTCCAGTCTTTCGTTCGTGGGATCAGGATTCATAGTGCTGTGTTACGTCCTCTTCAAAGAACTTCGCAAGTTCTCCTACAAGCTTGTCTTCTATCTTGCCCTTTCCGATATGCTTTGCAGTTTCTTCACTATGATTGGGGATCCGGCTACAGGATTTTACTGTTATACTCAGGGCTATAGCACTCATTTCTTTTGTGTGGCATCGTTCTTGTGGACCACAACAATTGCATTCACCCTTCACCGTACTGTTGTTAGACACAAAACCGACGTTGAAGATTTGGAGGCTATGTTTCACTTATATGTATGGGGAACATCGTTAGTGTTGACTGTTATACGTTCAATTAGTAATAACCATGGACATTTGGGTACCTGGTGTTGGGCACAGTCTAGTCGTACAGGAAAGGCTGTTCACTTTATAACATTTTACATGCCACTCTGGGGTGCAATTCTCTACAATGGGTTTACTTACCTTCAAGTGATACGCATGCTTAATAATGCTACCCGTATGGCAGTTGGCATCTCAGATAGGGCTTACCAGGGAGATGATTGTTTTGTTTTTGGCACTCAATGTGTTGTCTTGTCAGTAATCCAGAATTATACTTTAGCTTTAAACAGATGGGGATATTATCCGCTCATCCTCATAGGGTCATGGGCTTTTGGTACAATCAACCGCATTCATGATTTTATTGAGCCAGGTCATAAAATCTTCTGGCTGTCAGTTCTTGATGTTGGGATGGCTTCACTAATGGGCTTGTTCAATTCAATAGCATATGGTCTGAATTCTTCTGTACGGCGGGCAATTTATGAAAGATTAGACTTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAACAATTCAAGGTTCCGGAATCAAGAACAAGAAGGTGAACTGGTTTCCTTGAGAAGTCTAGATCAGCCATAG 999 43.54 MAVGVRVAGSIIGRDRVLTAVIAGASSLSFVGSGFIVLCYVLFKELRKFSYKLVFYLALSDMLCSFFTMIGDPATGFYCYTQGYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGTSLVLTVIRSISNNHGHLGTWCWAQSSRTGKAVHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGISDRAYQGDDCFVFGTQCVVLSVIQNYTLALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLSVLDVGMASLMGLFNSIAYGLNSSVRRAIYERLDLFWPEKLRRWLPNNSRFRNQEQEGELVSLRSLDQP 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1635329 1639448 + CmoCh09G003730.1 Cmo09g00373 388375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 276 292 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 18 33 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 35 49 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 96 114 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 258 275 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 228 249 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 51 73 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 81 94 IPR022340 -
Cmo09g00373 332 PRINTS Putative plant GPCR, GCR1, signature 119 134 IPR022340 -
Cmo09g00373 332 Pfam Slime mold cyclic AMP receptor 21 171 - -
Cmo09g00373 332 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 18 286 IPR017981 GO:0004888|GO:0007166|GO:0016021
Cmo09g00373 332 PANTHER TRANSMEMBRANE PROTEIN 116 15 323 - -
Cmo09g00373 332 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 15 323 - -
Cmo09g00373 332 PRINTS GCR1-cAMP receptor family signature 79 97 IPR022343 -
Cmo09g00373 332 PRINTS GCR1-cAMP receptor family signature 234 252 IPR022343 -
Cmo09g00373 332 PRINTS GCR1-cAMP receptor family signature 266 285 IPR022343 -
Cmo09g00373 332 PRINTS GCR1-cAMP receptor family signature 29 47 IPR022343 -
Cmo09g00373 332 PRINTS GCR1-cAMP receptor family signature 48 63 IPR022343 -
Cmo09g00373 332 SUPERFAMILY Family A G protein-coupled receptor-like 17 303 - -
Cmo09g00373 332 Gene3D - 15 309 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01688 Cmo09g00373 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01751 Cmo-Chr1:13028899 Cmo09g00373 Cmo-Chr9:1635329 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00373 K22987 - csv:101216480 598.971