Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00951 ATGGAGACGACGATGAAGCTGCTGCGGCCGGGGAAGTCTCCACGGGCTCCTGCATTCACCTGTTCGAAGTCGGTGAACTTATCGCCGGAATTGGATCTTCAGCAGACGCCAAGTTCACGCAAGGATTCTCGACGGAGGATCCGAAATCTTTCGTTGATTAAGAGAAAGTCGGTGCCGACCGGGCGGAGGAGTAGGCCGCAGACTCCACTTCTTAAGTGGAAGGTCGACGACAGAGTTGATGGTAGAGGTGAAGAAGACGAAGACGAAAAGAAGACGGAATCGGAGAACGGAGAGAAAGATCTCCGGCGGATGAGTGGGGAAAGAGATGTGGTCGTATCGGCGAGGAAGCTCGCTGCTGGTTTTTGGCGGTTTCAGAAGCCGGAGGTGAGCGCTGATGGAGGAAGGAGCGGTTTGAGACGCACTGTGGAGCAGAGGATCGGTTTTCAGCCTGTTGCTGGCCATGTTCGTGCTCCGATTCTCCGTCATCACAATAACAACATATTCAGTAATGAAACGAGGCATCTGTTACAGGGCCAAACCTCAACTTCTGGTATGAGAAATGGCGTTCTGAGCAAGATTGAACCGTTCTTTCAATTCTCCAACTCAGTTATGGAAGGGGCAACAAAATGGGACCCTATTGGCTCGAAAATTCCAGTTGAAAGGGACCATGTTTACAATCGAAGAGAGCTTCTTGACCAGCAAGTGAGCCTGGTTTCTGTTATATCTTCCCTTGAAGCTGAACTCAAGCAAGCACGGGTGCGCATTTCGGAACTCGAAACGGAACGCCATGCATCGAAGAAGAAGCTTGAGAGCTTCTTGAGAAAGGTTGATGAGGAAAAGACTGTATGGCGTATGAGGGAACATGAGAAAGTACGTGTGTTTATAGAAAGCATCAGGACTGAGTTGAACCATGAAAAGAAAAATCGAAGAAGAGTAGAGCATTTCAATTCGAAACTGGTCCATGAGCTAGCTGATGCTAAATCCTTGGTGAAGAAGCTGATGCAGGACTATGAAGAAGAAAGGAAGGAAAGGGTATTGATTGAACAAGTATGTGAAGAACTTGCTAAAGAAATTGGAGATGATAAGGCAGAAATAGAGGCATCGAAGAGAGAATCTGCGTTATTTAGAGAGGAAGTGGAAGAAGAGAGGAAGATGTTGCAGTTAGCAGAAGTATGGCGTGAAGAACGCGTTCAAATGAAGCTGGTCGATGCGAAGGTAGCGGTCGAAGAGAAGTACTCTCAGATGAACAAGCTTGTTGCTGATCTTGAAAACTTTCTAAGATCAAGGGGAGCAATCTCAGACGTTAAGGAGATGAAAGAAGCTGTATTACTTGAACAGGCTGCTTCTGCAATGAACATCCAAGACATACAGCACTTATCATACCAACCTTCTAAGCCAGATGATATATTCTCCATCTTTGAAGAAGTTAATTTTGGTGAAAATCATGAGAGGGAGGTTAAGCCATACAGTTCTTACAGTCCGGTGACCGAAATCTCTAAAGTCGGAACAGTGAGCCCCGACGTAAATGTAGATTCGGGTAAACGAGCGGATGGCACTCTGATGGCAGCCTTTAATCAGAATGGAAACATGGACGACGAGAGTGGATGGGAGACAGTGAGCCAAATTGAGGATCAGGGCTCGAGTTATTCGCCCGAAGGAAGCTCGACACGACCCGGTAATAAGAATAGTGAAAATAGTAGCAGCACGACAGGCTCAGAGACTGTAACAGACTGGGAAGAACACGGAGGAGGTGGAGAAACAACAATCAACATCAGTGAAGTCTATTCAGAACTTGTAAGGAAATCAAAGAAAGTATCAAACTTAACGAAGAAGCTTTGGAAATCCGGCCATAACAATGGTGGCGACAGCAACAAGATGATACCAGTAAAGGAGCCTCATGGTGGGTCTAGTCCAGATTTCATGGATCAGTGGAGTTCCTTCGACTTAGGTGATGCTCAAATAGCTCGACAGATGAAAGGCCAAATGAATGTGAAGGAAGGCCATAAACTACAGCTGCGGCATGTCCTTAAACAGAAGATATAG 2043 46.4 METTMKLLRPGKSPRAPAFTCSKSVNLSPELDLQQTPSSRKDSRRRIRNLSLIKRKSVPTGRRSRPQTPLLKWKVDDRVDGRGEEDEDEKKTESENGEKDLRRMSGERDVVVSARKLAAGFWRFQKPEVSADGGRSGLRRTVEQRIGFQPVAGHVRAPILRHHNNNIFSNETRHLLQGQTSTSGMRNGVLSKIEPFFQFSNSVMEGATKWDPIGSKIPVERDHVYNRRELLDQQVSLVSVISSLEAELKQARVRISELETERHASKKKLESFLRKVDEEKTVWRMREHEKVRVFIESIRTELNHEKKNRRRVEHFNSKLVHELADAKSLVKKLMQDYEEERKERVLIEQVCEELAKEIGDDKAEIEASKRESALFREEVEEERKMLQLAEVWREERVQMKLVDAKVAVEEKYSQMNKLVADLENFLRSRGAISDVKEMKEAVLLEQAASAMNIQDIQHLSYQPSKPDDIFSIFEEVNFGENHEREVKPYSSYSPVTEISKVGTVSPDVNVDSGKRADGTLMAAFNQNGNMDDESGWETVSQIEDQGSSYSPEGSSTRPGNKNSENSSSTTGSETVTDWEEHGGGGETTINISEVYSELVRKSKKVSNLTKKLWKSGHNNGGDSNKMIPVKEPHGGSSPDFMDQWSSFDLGDAQIARQMKGQMNVKEGHKLQLRHVLKQKI 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4999968 5002442 + CmoCh09G009510.1 Cmo09g00951 388953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00951 680 MobiDBLite consensus disorder prediction 525 587 - -
Cmo09g00951 680 MobiDBLite consensus disorder prediction 1 105 - -
Cmo09g00951 680 MobiDBLite consensus disorder prediction 525 576 - -
Cmo09g00951 680 MobiDBLite consensus disorder prediction 69 105 - -
Cmo09g00951 680 Coils Coil 320 371 - -
Cmo09g00951 680 Coils Coil 669 680 - -
Cmo09g00951 680 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 32 680 - -
Cmo09g00951 680 Coils Coil 241 275 - -
Cmo09g00951 680 MobiDBLite consensus disorder prediction 19 36 - -
Cmo09g00951 680 PANTHER GB|AAF24581.1 32 680 IPR043424 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00920 Cmo09g00951 CCT
Cmo09g00951 Cmo16g00894 CCT
Cmo09g00951 Cmo16g00894 ECH
Cmo06g00920 Cmo09g00951 ECH
Cmo01g01183 Cmo09g00951 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01033 Cmo-Chr4:5169346 Cmo09g00951 Cmo-Chr9:4999968 0 dispersed
Cmo07g00296 Cmo-Chr7:1439932 Cmo09g00951 Cmo-Chr9:4999968 1.58E-67 dispersed
Cmo09g00951 Cmo-Chr9:4999968 Cmo16g00894 Cmo-Chr16:5138988 0 dispersed
Cmo15g01381 Cmo-Chr15:9405419 Cmo09g00951 Cmo-Chr9:4999968 2.95E-16 transposed
Cmo01g01183 Cmo-Chr1:9618144 Cmo09g00951 Cmo-Chr9:4999968 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00951 - - csv:101222707 1042.72