Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00007 ATGGCCTCTGTTTCAGCTACCTCTCTTAGGTTCCAGCTACCGCCCAACCAACATTCCAAGATCTACCAGGAAGACGGCGGCGCTGATAGGCACTCCAGCTTCTTATCTTTGAAATCCTCCTTCTTCTCTCCTTTACGTAACATTCCTTCTTTAAGGAAGCAAAACTCTGCTGTTGCAGCTGCCCCCAAGGTCTCCATGCGCGTCGCGTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACGCCTTTTGAAAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATACGAGGAAGGCGAGAAAGGCACAGATCCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCCATAGCTGCTGCAGTGGGAATCGTGGCACTTGTGCAAAAACCAGGAAATGTGCTTCACAAGGATAGGATGGTTAGCGAGATCGACCCAACAAAGTACAAGAATACCTTGCCCGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATCCTACGAGTTCTTCAAGAACTACTATTCTTACATGGTTGGAACAGAGAATGCAGCCAACTACAAAACTTTCATATACCTTGCTGCTTCAGCGTCTGCAGAAGTCATTGCCGATGTTGCTCTTTGCCCCATGGAGGCCGTCAAAGTTGGCGTCCAAACTCTGAGGTCAATTCTGAAGGTGCTCTTGGATACCATGATGAAATTTGCCTCTTTCCAAACAATTGTTGAGAGGCTGTACACTTGTGCCATCCCAAGGCCTAAAGAGCAGTGTAGCAAATCCCTGCAGCTTGGAGTGAGATTGCTGCCAACAACTGGTGGCGCTACCACTGCTCCTGCCGCCAACAAGTCAAGGGGGGAGCCTGTTTGTGCACCCTAA 948 48.1 MASVSATSLRFQLPPNQHSKIYQEDGGADRHSSFLSLKSSFFSPLRNIPSLRKQNSAVAAAPKVSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKNANEFDTRKARKAQIQKDEAIGKVLPIAAAVGIVALVQKPGNVLHKDRMVSEIDPTKYKNTLPGYSAQGACKFGSYEFFKNYYSYMVGTENAANYKTFIYLAASASAEVIADVALCPMEAVKVGVQTLRSILKVLLDTMMKFASFQTIVERLYTCAIPRPKEQCSKSLQLGVRLLPTTGGATTAPAANKSRGEPVCAP 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 39304 41957 + CmoCh11G000070.1 Cmo11g00007 390626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00007 315 SUPERFAMILY Rubredoxin-like 71 116 - -
Cmo11g00007 315 ProSiteProfiles Rubredoxin-like domain profile. 71 111 IPR024934 GO:0005506
Cmo11g00007 315 Gene3D - 72 111 - -
Cmo11g00007 315 Gene3D Mitochondrial carrier domain 138 283 IPR023395 -
Cmo11g00007 315 Pfam Rubredoxin 74 108 IPR024935 GO:0005506
Cmo11g00007 315 CDD rubredoxin 74 111 IPR024935 GO:0005506
Cmo11g00007 315 SUPERFAMILY Mitochondrial carrier 178 270 IPR023395 -
Cmo11g00007 315 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 14 154 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00024 Cmo11g00007 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00007 Cmo-Chr11:39304 Cmo15g00842 Cmo-Chr15:4272535 1.72E-43 dispersed
Cmo10g00020 Cmo-Chr10:129311 Cmo11g00007 Cmo-Chr11:39304 1.28E-82 wgd
Cmo11g00007 Cmo-Chr11:39304 Cmo11g01578 Cmo-Chr11:11333119 1.96E-37 wgd
Cmo11g00007 Cmo-Chr11:39304 Cmo14g00771 Cmo-Chr14:3917356 4.19E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00007 - - cmos:111429830 254.988