Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00149 ATGGAGGCTCAACCTTTGCCAACCACAGCTGATGCAGTTCAATCAGCTGGAGAAGATGAAGAACATGCTCCCAAACATAAGGTTCCTTTAATGGCTGAGTTGGAGAAGCCTTCCATGGAGCCCCTCTCACTCGCATCTGCCTCTTCAACTTGGAAGGAAGAGGATCATGAGCATGAACAAAGGCTAAAAATGGCGAAAGGTGAAATGAGGGAAGTGAAGGAAGAAAACCAGCGGCTAAAAAGGTGTTTAGATCAAATGATGAGGGATTACGAGAGCCTCAAAAGGCAATTCCATGATATGAGTACCATAAACAACGAGGCAGCTGAAGAAGTTGAGGACATGGTTTCACTGACATTGGGAAGATCCTCAAGCGACCAAAACAAGAACACTTGCCCTGAAACAAAGCCAGATCTTCAAAACATTCAAAGTCCGGCCGACAGTGAACAAGGCAAGGAGGAAGATGCCGGACAGACTTGGCCGCCGGGTAAAGTCTTGAAGGGGTTGGCTGCGCCGGCGGCCGGAGAGGATGAAGTTTCTCAGCAGAATCCTCCGAAGAAGACGAGGGTTTGTGTGCGGGCTCGGTGTGATACGCCAACGGTGCAAAGGAGTGTTGATGATATTTCAATACTAATCACCACCTATGAAGGAACTCACAACCACCCTCTACCTGTGTCAGCCATGGCCATGGCTTCAACCACGTCGGCCGCCGCCTCAATGCTCCTCTCGGGTGCTTCCACCTCGACCTCTCGGCCGGGACTAAACCCTTCACCGATCGGGACAGCGTCTGCAAATCTCCATGGAATGAACATGTACACCAATTCAAAGCAATTCTACTTGTCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACCTTAGACCTCACTTCAAATCCTCCCTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTCCTTTCCACAAAATCCCTTCAACTTATCCCCCAAAATATCCCTTCACCAGCCTTGATTTTGGGTCTTGGAATACTAATATCAACAAAAATGTATTAGGAATGTCATCAGATCTTGCTAAGCAATTCCCTCCCCATACTAACATCTACCAAGCTTGCCTTCAACAATTTGCCAAACCTTCAACTCCTCCACCCCCGCCTCTACCGGACACGATAGCAGCAGCAACCAAGGCAATTACGTCCGACCCGAGTTTCCAATCAGCATTGGCGGCTGCCCTGAGCTCGATCATCGGCGGCGGAAATGGGGGCGAGGCGGTTCAGGCAATGAGTAGCTATGTCCAAGCAGCACAGGGACAAGGAAGTATGGGGTTTCAGGCAGCTCCATCGTTGACATACTCCACATCCAAGAGTCCTTCATCTCCTGGTGACAGTAGAGACGATGATACCAAGTGA 1398 49.07 MEAQPLPTTADAVQSAGEDEEHAPKHKVPLMAELEKPSMEPLSLASASSTWKEEDHEHEQRLKMAKGEMREVKEENQRLKRCLDQMMRDYESLKRQFHDMSTINNEAAEEVEDMVSLTLGRSSSDQNKNTCPETKPDLQNIQSPADSEQGKEEDAGQTWPPGKVLKGLAAPAAGEDEVSQQNPPKKTRVCVRARCDTPTVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGASTSTSRPGLNPSPIGTASANLHGMNMYTNSKQFYLSNSSMLSSSLNHPTITLDLTSNPPSASSSSSSSSSSSPFHKIPSTYPPKYPFTSLDFGSWNTNINKNVLGMSSDLAKQFPPHTNIYQACLQQFAKPSTPPPPPLPDTIAAATKAITSDPSFQSALAAALSSIIGGGNGGEAVQAMSSYVQAAQGQGSMGFQAAPSLTYSTSKSPSSPGDSRDDDTK 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 752417 756064 + CmoCh11G001490.1 Cmo11g00149 390768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00149 465 MobiDBLite consensus disorder prediction 15 33 - -
Cmo11g00149 465 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 200 455 - -
Cmo11g00149 465 Coils Coil 55 96 - -
Cmo11g00149 465 MobiDBLite consensus disorder prediction 440 455 - -
Cmo11g00149 465 MobiDBLite consensus disorder prediction 120 146 - -
Cmo11g00149 465 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 200 IPR044810 GO:0003700
Cmo11g00149 465 MobiDBLite consensus disorder prediction 296 319 - -
Cmo11g00149 465 SUPERFAMILY WRKY DNA-binding domain 175 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo11g00149 465 MobiDBLite consensus disorder prediction 440 465 - -
Cmo11g00149 465 MobiDBLite consensus disorder prediction 50 76 - -
Cmo11g00149 465 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 43 200 - -
Cmo11g00149 465 ProSiteProfiles WRKY domain profile. 174 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo11g00149 465 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 200 455 IPR044810 GO:0003700
Cmo11g00149 465 MobiDBLite consensus disorder prediction 1 76 - -
Cmo11g00149 465 Gene3D WRKY domain 172 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo11g00149 465 MobiDBLite consensus disorder prediction 120 165 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00198 Cmo11g00149 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00149 Cmo-Chr11:752417 Cmo19g00938 Cmo-Chr19:8631530 1.56E-20 dispersed
Cmo10g00198 Cmo-Chr10:885235 Cmo11g00149 Cmo-Chr11:752417 1.16E-91 wgd
Cmo11g00149 Cmo-Chr11:752417 Cmo13g00963 Cmo-Chr13:8331688 5.91E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00149 - - cmax:111471155 789.26