Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00961 ATGGCGCCGGTTCTGTCTCGGTTACTGTTCCGGCGGATTGTTCAGGCACCATTTCTTCGCACCGCCACCGGCTTTAGCTTTTGCAGAAATGTTCATTCTATCCCTTTCTCTTCGGTGGAAGTGGAGCAAATATCAGGTTCTAAGCCAGGAGAAGTTCATAACTTAGGAATGTTGACACAACATGTGCTTATTTTAGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTGTAGATCCTTTAAATGGAGAACCATTTATTAAAATTGCTGAAGTTAATGAAACAGAAATTCAGCCATTTGTGAAGAGCCTAACCAAATGCCCCAAGCATGGCTTGCATAATCCTTTCAAATCACCTGAGAGATATCTTTTGTATGGAGATGTATCGTCCAAGGCTGCCGACATGCTTTCGACACCAAAGGTGACTGACTTCTTTGCAAGGTTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGGGCTGAAGTCAATGTTACTGTTAAATTTTTAAGGAACTTCTCTGGTGATCAGGTAAGGTGCTTCAACAACTCTTTTAAGGTCAGCCCCCAAGGGGATGACCATGTTTGCTTAGGCCTATTCAGAGGTCAGGTTCGCTTCCTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTACCGTTGGCCTTATGGTCCTGTAGCAATTATCACTCCTTTCAACTTCCCCTTGGAAATTCCTTTACTTCAGGTGATGGGTGCACTTTACATGGGCAACAAACCTGTTCTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTACTACACCATTGTGGTCTTCCTCTTGAAGATTTAGATTTTATAAATTGCGATGGGAAGACGATGAACAAGTTATTGATCGAGGGAAATCCATCCATGACTCTTTTCACTGGTAGCTCAAGAGTGGCAGAGAAGTTGGCTGTCGACTTAAAGGGTCGTATTAAACTGGAAGATGCAGGTTTTGATTGGAAAGTCTTGGGACCAGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGCAGCGGCCAGAAGTGCTCGGCAGAGTCCATACTGTTCATGCATGAGAACTGGTCGAAAACTTCACTCATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAACTTGACTGATTTAACGATTGGCCCTGTTCTTACGTTAACAAATGAAATGATGCTAGATCACATGAACAAATTGCTCAAGATACCAGGAGCAAAGCTACTCTTTGGAGGTGAACCTCTCAAAAACCATTCCATTCCAGCCATTTATGGCGCTATGAAACCCACTGCAGTGTATCTTCCACTCGAAGAAATGATGAAAGCTGAGAATTATGAGCTTGTTACTAAGGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAGCGATCAACTGTCAGTTGTGTTGGATGCTCTTGAGCGGATGCATGCTCATCTAACAGCAGCGGTTGTTTCAAATGACCCTCTTTTTCTACAGGAAGTTATTGGGAATACTGTAAACGGGACGACGTATGCGGGTTTACGAGCTAGAACAACAGGAGCTCCACAGAACCATTGGTTTGGACCAGCAGGTGACCCTAGAGGTGCTGGTATTGGAACTCCAGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCCTTGCCCTTGAATTGGACAACTCCACCATCTTCTTGA 1773 42.92 MAPVLSRLLFRRIVQAPFLRTATGFSFCRNVHSIPFSSVEVEQISGSKPGEVHNLGMLTQHVLILVQGKWIGSSGWNTIVDPLNGEPFIKIAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLYGDVSSKAADMLSTPKVTDFFARLIQRVSPKSYQQAWAEVNVTVKFLRNFSGDQVRCFNNSFKVSPQGDDHVCLGLFRGQVRFLARSFAVPGDHLGQQSHGYRWPYGPVAIITPFNFPLEIPLLQVMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLIEGNPSMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKVLGPDVREEDYVAWVCDQDAYACSGQKCSAESILFMHENWSKTSLISKIKDLAERRNLTDLTIGPVLTLTNEMMLDHMNKLLKIPGAKLLFGGEPLKNHSIPAIYGAMKPTAVYLPLEEMMKAENYELVTKEIFGPFQIITEYKSDQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPLNWTTPPSS 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8317712 8321854 - CmoCh13G009610.1 Cmo13g00961 395016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00961 590 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 205 589 - -
Cmo13g00961 590 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 27 191 - -
Cmo13g00961 590 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 205 589 IPR044638 GO:0004029
Cmo13g00961 590 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 27 191 IPR044638 GO:0004029
Cmo13g00961 590 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 344 532 IPR016163 GO:0016620
Cmo13g00961 590 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 341 IPR016162 GO:0016491
Cmo13g00961 590 Pfam Aldehyde dehydrogenase family 79 532 IPR015590 GO:0016491
Cmo13g00961 590 SUPERFAMILY ALDH-like 64 558 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00961 Cmo-Chr13:8317712 Cmo10g00162 Cmo-Chr10:733141 3.80E-11 dispersed
Cmo13g00961 Cmo-Chr13:8317712 Cmo12g00001 Cmo-Chr12:477 1.52E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00961 K00294 - csv:101214440 1011.13