Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00580 ATGTCATGTGCCTGCCTCTATTTTTGCTTTTACAAGTGGAAGATTGTGGGACAAAAGTCTCAAACTTTTACATCTGAAAACGAGGAAGTCATACATCCACTCTCCCAACGCATAACTGCCGAATCAGCTCTGGCTGCTCGTAGACGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCGTCTTTGTGTTCTTCATTCGTCTTGCTTCGTTATTCTTCCTTTTTTTTTGCTCTCTATTTCTCTGTTCTTAGTTTTTAGCTCATCAGATGAGGCACAATTCCAAGAATCAACCTCAGGAAATTTGCAGAGAACATGGGCTGAATTATGTTGTTTCGGTTGCTCGTGCCTACAGCTTTTCTGGCCGAGAGTGGTCTTGCGCAAATTGCTCAATATCAGCGCCTTAGAGTCGGATTACAGTGCCGATACCGAAGATGATGAGGATGTAAATTCTTCCGATTCTGAAATCGAAGAATGTCGTTTTAGGGGAAGAGAATCGCGCTTTAAGGTAGACAACAGAGATGAACCACTGGTTGATGCTAATGATGTGCTGCCGAGGTTGAGAAGAAGAAATTCAGAAACATTTAGGACGCAATATATAAACACAAAAGAACTCAGAATATGTGTTGGGACTTGGAATGTTGGAGGAAAACTACCTCCTGAAGATCTAGATATTGATGGCTGGATTGATACCAATGAGCCAGCTGATATCTATGTCCTTGGTTTCCAGGAGATTGTACCATTGAATGCTGGAAATATATTTGGTGCTGAAGACAGTCGCCCAGTTGCAAGGTGGGAAGATATTATCCGCGAAACACTGAATAGGGTTAGACCTACTACAACTAAGATCAAATGCTTTAGTGATCCACCATCCCCATCAAAGTTTAAGCCATTTGACGACATCCCAAATTTAGAGGAGGAGATTCTGCAGGAAAGTGATAGTGACGTTGGTGAGGAGGTGCATCCATGTGATGAAGAATTCTATGGCAAGGAAAATGGTGACGAACTAGTCAGTGACACAAATCTAAGCTTGAAGATCCCAATTTCAGAACTTTCTGAAAATACCAAATCAGGGATACCTGTAGAACAGGATTTACTGAGGCAATATTCTTCTCCAAAGAGATTGGATCGGTTAAATTTCGTACGGACTGAAGACAGCACAGAGAATGACGAGGCTGTCTTGCAACCGGACAGAAGATTAACTAAAATGCTTAGTGGGTCAGAAAGGATTGGTTTGTGTTGGCCTGAACCTCCACTACACTTACTACCCCATATTGTTTTAGAGAGACCTAACTCATTTAAGTCAATAAAATCGTTTAAAACATCCAAGTCCTTTGGGAAATATAGTTCTTTTAAGTCAACCATGAATGAAATGCCATCAGGGGCTGCTTTGCTTGGAGAAATTGATCTCGAGTCTCTCCTAAAACGAAAGAGAAGATCGTCATATGTTAGAATAGTAAGTAAGCAAATGGTTGGTATTTTCCTCACAATATGGGTTCGTAAGAGTTTGCGAAGGCACATTCAGAATGTAAATGTATCTACTGTTGGTGTTGGTGTAATGGGCTACATCGGCAACAAGGGATCCATATCTGTCAGCATGTCCATATATCAGACCCTATTTTGCTTTATATGCACTCACCTGACTTCAGGTGAAAAGGAGGGGGATGAACTTAAAAGAAATGCTGATGTGAGCGAAATACATAGAAGAACTTCATTCCATCCACTTAATGGTATTGGGTTTCCTAAAGTGATCCACGACCATGAGCGGATAATCTGGCTGGGTGATTTAAATTACCGCATCAACTTGTCTTACGAGAAGACAAGAGAGCTTATCTCGAGAAAAGAATGGTCTAGGTTGGCTGAGAGTGATCAGTTATTGCGGGAGCTTAAGAAGGGTCGTACATTTGATGGATGGACTGAGGGAAACCTAAATTTTCCACCAACCTATAAATACGAGAATAATTCAGAAAAGTATTGTGGCGAAGATCCAAAAGTTGGAAGACGTACTCCAGCATGGTGTGACCGTATACTTTCATATGGCAAAGGATTGAAATTGTGCAGATATAGGAGGACTGAAATTAACTTTTCTGATCATAGACCAGTGACAGCCACCTATGTGGCCGAGGTCGAGGTTTTCTGTCCCCGTAAGCTACAGCGAGCTCTGACATTTACAGATGCAGAGATCGAAAAACAAGTAGCAATCGATGTATACTGA 2226 41.37 MSCACLYFCFYKWKIVGQKSQTFTSENEEVIHPLSQRITAESALAARRRLLLLLLLLLLLLLRLRLCVLHSSCFVILPFFLLSISLFLVFSSSDEAQFQESTSGNLQRTWAELCCFGCSCLQLFWPRVVLRKLLNISALESDYSADTEDDEDVNSSDSEIEECRFRGRESRFKVDNRDEPLVDANDVLPRLRRRNSETFRTQYINTKELRICVGTWNVGGKLPPEDLDIDGWIDTNEPADIYVLGFQEIVPLNAGNIFGAEDSRPVARWEDIIRETLNRVRPTTTKIKCFSDPPSPSKFKPFDDIPNLEEEILQESDSDVGEEVHPCDEEFYGKENGDELVSDTNLSLKIPISELSENTKSGIPVEQDLLRQYSSPKRLDRLNFVRTEDSTENDEAVLQPDRRLTKMLSGSERIGLCWPEPPLHLLPHIVLERPNSFKSIKSFKTSKSFGKYSSFKSTMNEMPSGAALLGEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRKSLRRHIQNVNVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICTHLTSGEKEGDELKRNADVSEIHRRTSFHPLNGIGFPKVIHDHERIIWLGDLNYRINLSYEKTRELISRKEWSRLAESDQLLRELKKGRTFDGWTEGNLNFPPTYKYENNSEKYCGEDPKVGRRTPAWCDRILSYGKGLKLCRYRRTEINFSDHRPVTATYVAEVEVFCPRKLQRALTFTDAEIEKQVAIDVY 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2783779 2791573 + CmoCh15G005800.1 Cmo15g00580 398088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00580 741 Gene3D Endonuclease/exonuclease/phosphatase 440 739 IPR036691 -
Cmo15g00580 741 Gene3D Endonuclease/exonuclease/phosphatase 188 292 IPR036691 -
Cmo15g00580 741 SMART i5p_5 403 717 IPR000300 GO:0016791|GO:0046856
Cmo15g00580 741 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 123 735 IPR045849 GO:0004445|GO:0046855
Cmo15g00580 741 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 3 123 735 - -
Cmo15g00580 741 SUPERFAMILY DNase I-like 198 732 IPR036691 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02580 Cmo15g00580 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00174 Cmo-Chr9:779483 Cmo15g00580 Cmo-Chr15:2783779 5.71E-24 dispersed
Cmo15g00580 Cmo-Chr15:2783779 Cmo16g01129 Cmo-Chr16:8035597 2.11E-153 dispersed
Cmo15g00580 Cmo-Chr15:2783779 Cmo04g02580 Cmo-Chr4:18877131 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00580 - - bhj:120075315 1137.87