Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00733 ATGCATCACCTGCCTCAGTTTTTCTCTCCCAGGAAGCGAAGCAAAGCCATGGATCCGAGGAAAATTGCAGGGAAACCCAAGCTTTACCGACTTAATGCGGCCAAGAACATCGACTATGACGCTGCTTACACGTCTTCTTCGTTCGATGATTCCTCTGGGTCTCTCTACACTCGCTCCATGGAGACCTTCAATCCCTCGAGCTTCCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAGATGGCCCTGACGACTTCGCTATTCCGATGGAGGCTTGGGAGGCCAGGAAGGTTCGTTCATCTTCTGATATTCTACCGAGGTCGAGGCTGTATCCCGTGGATAGTCCAAAGACAGAGGAGATTAGTAAGGAGAAGGAAGATGAAGAAAACGAAGACGAATTGTGCCGGAGGGTTAAGGATTCAGTACGAATTAGCGATGAGATGTCCACGCTGAAGACTGAACTTCCCGAGTTGAATGAACGCTGTATGGATACTGTTACTGGACGTAGCCCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCGCCGCCGTGTATGCGGCTTCCAGATTTTGATAACGCTTTCTCGACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGAGGATGATAAAAAACAGGATGAAGTAGAAGAACGAGTCGAACCTTTGGTTGAACGAGAAGTCGAGGAAAATATTGTCAGGCCCGAGGAGAGCGCAGCGCTCATAGAGTCCTGGGGTTCCTTCACGACCTCGAATGACGATGATTCTTCGAGCAGTACGACGGAGCCTGCAAATATTTCACCCAATATGAGAGGTAAACCCATTATCACATCCTGGGTGGAAACCGGTAGGCTTCTTGGACGCGGTTCATTTGGATCAGTTTCCGAAGCAATTTCAGAGGATGGAATCTTTTTTGCTCTTAAAGAAGTTTCACTGCTCAATGAAGATAGTCAGGGAAGACAGAGCATCTTTCAACTTCAGCAGGTATTACACTTGTTCGAGATATCTCTTCTAAGTGAATTTGAGCATGAGAACATAGTCCAGTACTACGGCACACATTCGGTATTGCCCTTCTCCGATGGGTCAAAACTCTATATCTTCCTGGAGCTTGTATCTCAAGGCTCCCTTCTGAATTTATATCAGAGAACAAACCTTCTGGATTCCATTGTTTCTGCCTATACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATTCAACGACGTTAAATCTTGCAAGGGAACTGCGTTCTGGATGGCACCTGAGGTGGTTAATGGGAAGGGTCAAGGATACGGGCTTCCGGCCGATATTTGGAGCCTTGGGTGTACAGTATTGGAAATGTTAACTCGAAAGCTTCCGTACTCAGAAGTCGAAAGTCCTATGCAGGCACTATTTAGGATTGGAAAAGGCAAAGCGCCTGTAGTTCCCGAGTCTCTCCCAAAAGATGCACAGGATTTCATTTTGCAGTGCCTACAAGTTAATCCACACGACCGTCCTATCGCTGCTGATCTAATAAATCATCCGTTTGTGAAACGACCAGTTTCCAGTTTATCAGTGTCGGCATCTCCTTACAACAAGCCAGGCAGAAGAATTTAA 1725 46.2 MHHLPQFFSPRKRSKAMDPRKIAGKPKLYRLNAAKNIDYDAAYTSSSFDDSSGSLYTRSMETFNPSSFRIKGLDGEVDLICRTLGLDGPDDFAIPMEAWEARKVRSSSDILPRSRLYPVDSPKTEEISKEKEDEENEDELCRRVKDSVRISDEMSTLKTELPELNERCMDTVTGRSPRSGINGARPPLLKPPPCMRLPDFDNAFSTWDILKAFAPLEDDKKQDEVEERVEPLVEREVEENIVRPEESAALIESWGSFTTSNDDDSSSSTTEPANISPNMRGKPIITSWVETGRLLGRGSFGSVSEAISEDGIFFALKEVSLLNEDSQGRQSIFQLQQVLHLFEISLLSEFEHENIVQYYGTHSVLPFSDGSKLYIFLELVSQGSLLNLYQRTNLLDSIVSAYTRQILSGLKYLHERNVVHRDIKCANILVDVNGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSEVESPMQALFRIGKGKAPVVPESLPKDAQDFILQCLQVNPHDRPIAADLINHPFVKRPVSSLSVSASPYNKPGRRI 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3583896 3588366 - CmoCh15G007330.1 Cmo15g00733 398241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00733 574 MobiDBLite consensus disorder prediction 256 278 - -
Cmo15g00733 574 ProSiteProfiles Protein kinase domain profile. 289 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00733 574 MobiDBLite consensus disorder prediction 172 192 - -
Cmo15g00733 574 MobiDBLite consensus disorder prediction 113 139 - -
Cmo15g00733 574 MobiDBLite consensus disorder prediction 256 276 - -
Cmo15g00733 574 SUPERFAMILY Protein kinase-like (PK-like) 263 564 IPR011009 -
Cmo15g00733 574 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Cmo15g00733 574 PRINTS Tyrosine kinase catalytic domain signature 377 390 IPR001245 GO:0004672|GO:0006468
Cmo15g00733 574 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Cmo15g00733 574 PRINTS Tyrosine kinase catalytic domain signature 522 544 IPR001245 GO:0004672|GO:0006468
Cmo15g00733 574 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 24 153 - -
Cmo15g00733 574 MobiDBLite consensus disorder prediction 119 139 - -
Cmo15g00733 574 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 178 563 - -
Cmo15g00733 574 Pfam Protein kinase domain 290 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00733 574 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 178 563 - -
Cmo15g00733 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Cmo15g00733 574 Gene3D Transferase(Phosphotransferase) domain 1 288 569 - -
Cmo15g00733 574 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Cmo15g00733 574 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 24 153 - -
Cmo15g00733 574 SMART serkin_6 289 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02435 Cmo15g00733 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00733 Cmo-Chr15:3583896 Cmo02g01089 Cmo-Chr2:6606331 2.30E-73 dispersed
Cmo15g00733 Cmo-Chr15:3583896 Cmo04g02435 Cmo-Chr4:18073433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74917 PF00069 Pkinase 1.80E-61 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00733 K13414 - csv:101218538 876.315