Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01045 ATGTTAGGAAGCAACGAAGCAGCTAAAGAAGCAATCTTTTACTCATACAATAGACATATCAATGCCTTTGCAGCTGTTCTTGATCAGAAAGTTGCAGAAGATATAGCAAAGCATCATGATGTGGTATCAGTACATGAGAACAAAAAACTAAAATTGCACACTACACGATCATGGAACTTTCTTGGAGTTGAGAATGATGGTGGAATTCCTTTGAACTCACTTTGGAACCTTTCAAGATTTGGTGAATCTACCATCATTGGCAACATTGACTCTGGTGTTTGGCCAGAATCAAAGAGTTTTAGTGACGAAGGATATGGACCTATTCCAACAAGATGGAAGGGAAGTTGTGAAGGTGGCACCAACTTTAGTTGCAACAGAAAGCTGATTGGAGCACGATATTTCAACAAAGGCTTTGCATCCGACACGGGACCTCTCAACTCAAGTTATGAAACAGCAAGGGACGTTGATGGGCACGGAACACACACCTTATCCACTGCTGGAGGCAATTTCGTTAAAGGAGTAAGCATTTTAGGGAATAGTTATGGCACTGCAAAAGGGGGTTCTCCTCAAGCCCTTGTTGCTGCCTATAAAGTATGTTGGTCTACAGATACAGGTGATGGGTGTTTTATGGCCGATATTCTAGCTAGCTTTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTGTCGGTTTCACTCGGTGGAGGTATTCAAGAATTTTCCGACGATCTTATAGCTATAGGGTCCTTCCATGCAGTGAAGAACGGCATCACTGTTGTTTGTTCAGCTGCAAATTCAGGACCAAGTGAAGACAAGGTAAAAGGAAAAATTGTAGTTTGTCTTAGAGGAGAAAATTCAAGAGGAGAGAAAGGTTATGTGGTTGCTCAAGCAGGTGGTGTTGGGATGATTCTAGCTAATGACAAGGAATATGGGGATGATCTTTCGGCTAGTCCTCACTTTCTTCCTGCTGCACATATAAGCTATACCGATGGTGAATCAGTCTACCAATATATCCAATCTACTAAAACCTCAATAGCTTACATGACTCAGGTGACTGAGTTGGGAATCAAACCAGCACCAATTATGGCTTCATTCTCTTCGAGAGGTCCCAACACAGTTGAACCCTCCATACTCAAGCCTGATATAACAGCACCAGGGGTGGATATAATAGCGGCTTTCTCTGAAGCAGCATCCATAACTGATTTACCTTATGATGAGCGTCATACTCAATTTATTACATTATCGGGCACTTCCATGTCATGCCCCCATATTTCTGGAATCGTCGGCCTTCTCAAAACGCTTTATCCAAATTGGAGTCCAGCAGCTATCAGATCTGCAATCATGACGACAGCTGGAACCGAAGCCAATGACTTAAATCCAATACTAAGCTCAGAAAAGGAGAAAGCAAACCCATTGGCATATGGTGCAGGTCATGTCCAACCAAACAAAGCATCAAATCCAGGCCTTGTTTACGACCTCTCCACTCAAGACTACTTGAATTTCTTATGTGCCCGTGGCTACAATAAAACACAAATGAAACTATTCACTAATGATACTTCATTTGTTTGTTCAAAGTCATTCAAAGTAACAGATTTGAACTACCCATCAATCTCAATGAATAATCTGAAATCAGAGGCAGTAGAGATCAAAAGAAGAGTAAAAAATGTGGGAAGTCCAGGCACGTATGTTGCTCAAGTCGAGGCACCACCAGGAGTTTCTGTTTCGGTAGACCCAAATACTTTGAAGTTCACTAAAACTGATGAAGAGAAGGATTTCAAAGTTGTGTTAAAGAGGGTATCAAATAATCAAACTGAAGAGCATGTGTTTGGAAAACTTTCTTATATTGTTTACTTGGGATCACATTCACATGGTTTGAATCCTTCTGCGGTTGATCTCCAACTTGCAACACAAACTCACTATAATCTACTTGGATCCGTGTTAGGAAGTAATGAAGCAGCCAAAGAAGCAATCTTTTACTCGTACAATAGACATATCAATGGTTTTGCAGCTGTTCTTGATCAGAAAGTTGCAGAAGATGTAGCAATATATGAAAACAAAGGACTAAAACTGCACACGACACGATCATGGAACTTTCTTGGAGTTGAAAATGATGGCGGAATTCCTTCGAACTCACTTTGGAACCTTTCAAGATTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGTGTTTGGCCAGAATCAAAAAGCTTTAGTGATAAAGAATATGGACCTATTCCAACAAGATGGAAGGGAAGTTGTGAAGGTGGATCCAACTTTAACTGCAACAGGAAGCTGATTGGAGCACGGTATTTCAACAAAGGCTATGCATCTGTTGCGGGACCTCTCAACTCAAGCTACGAAACAGCAAGGGACGACAATGGGCATGGAACACACACCTTATCCACGGCGGGAGGCAATTTTGTTGAAGGAGTAAGCATTTTTGGGAATGGTTATGGCACTGCAAAAGGGGGTTCCCCTAAATCCCTTGTTGCTGCCTATAAAGTATGTTGGCCTCCCGTGGAGGATGGTGGATGTTTTGTGGCCGATATTTTAGCTGGCTTTGAAGCTGCCATTAGTGATGGAGTTGACGTGCTGTCGGTTTCACTCGGTGGACGTGTTCAAGAATTTTATGACGATATACTAGCTATAGGGTCCTTCCATGCAGTGAAGAACGGCATCACTGTTGTTTGTTCTGCTGGAAATTCAGGACCATATGAAGGCACTGCCTCAAATGTTGCACCATGGATGTTAACGGTAGGAGCTAGCACAATTGATAGGCTTTTTACCACAAACGTGACATTGGGAGACAAGAGGCACTTCAAGGTAGAAGGAAAAATTGTAGTTTGCCTCAGAGGAGACAATTCAAGAGTGGACAAAGGTTACGTGGTTGCTCAAGCAGGTGGTGTAGGGATGATTCTTGCTAATGATTTGCTTGGTGGGCGTGCACTTTTGTCTGAAGCACACATACTTCCTGCTTCACATATAAGTTATACCGATGGTGAATCAGTCTACAAATACATCCAGTCTACTAAAACTCCAATGGCTTATATGACTAGCGTGAGGACTGAGTTGGGAATCAAACCAGCACCAATTATGGCTTCATTCTCGTCAAGAGGTCCCAACGTAATTGAGCCCACAATACTGAAGCCTGATATAACAGCACCAGGTGTGAACATACTAGCGGCTTTCTCTAACATAGCACCACCGACTCATTCACATTTTGATAAACGTCGGGTTCTATATAATGTTTTATCGGGCACTTCCATGTCATGCCCCCACATTTCTGGCATAGTTGGCCTTCTCAAAACCCTTTATCCAAAATGGAGTCCAGCAGCTATCAGATCTGCAATCATGACCACAGCTGAAACGAAAGCTAATGACTTAAATCCAATACTAACCTCAATAGAGGAGAAAGCAGGCCCATTTGCATATGGTGCAGGCCATGTCCAACCAAACAAAGCAGCAAATCCTGGCCTTGTTTACGACCTCTCCACCCAAGACTACTTGAACTTCTTATGCGCCCGTGGCTATAATAAAACACAAATGAGACTATTCACTAATGATACTTCATTTGTTTGTTCAAAATCATTCAAAGTAACAGATTTGAACTACCCATCAATCTCCATATTTGATCTGAGATCAAAGGAAGTGAACATCAAAAGAAGAGTGAAAAATGTAGGAAGTCCAGGCACGTATGTTGCTAAAGTAGAGGCACCGCCAGGAATTTTGGTTTCAGTAGACCCAAGTACTTTGAAGTTCACTAAATCGGATGAAGAGAAGGATTTCAAAGTTGTGTTGAAGAGGGTGCCAAATAATCAAACTGAAAATCATGTATTCGGAAAACTAGTGTGGTCTGATGGGAAGCATCGTGTTAGTAGTCCAATTTCTGTGACACTATTGATGTGGTAA 3909 41.95 MLGSNEAAKEAIFYSYNRHINAFAAVLDQKVAEDIAKHHDVVSVHENKKLKLHTTRSWNFLGVENDGGIPLNSLWNLSRFGESTIIGNIDSGVWPESKSFSDEGYGPIPTRWKGSCEGGTNFSCNRKLIGARYFNKGFASDTGPLNSSYETARDVDGHGTHTLSTAGGNFVKGVSILGNSYGTAKGGSPQALVAAYKVCWSTDTGDGCFMADILASFEAAISDGVDVLSVSLGGGIQEFSDDLIAIGSFHAVKNGITVVCSAANSGPSEDKVKGKIVVCLRGENSRGEKGYVVAQAGGVGMILANDKEYGDDLSASPHFLPAAHISYTDGESVYQYIQSTKTSIAYMTQVTELGIKPAPIMASFSSRGPNTVEPSILKPDITAPGVDIIAAFSEAASITDLPYDERHTQFITLSGTSMSCPHISGIVGLLKTLYPNWSPAAIRSAIMTTAGTEANDLNPILSSEKEKANPLAYGAGHVQPNKASNPGLVYDLSTQDYLNFLCARGYNKTQMKLFTNDTSFVCSKSFKVTDLNYPSISMNNLKSEAVEIKRRVKNVGSPGTYVAQVEAPPGVSVSVDPNTLKFTKTDEEKDFKVVLKRVSNNQTEEHVFGKLSYIVYLGSHSHGLNPSAVDLQLATQTHYNLLGSVLGSNEAAKEAIFYSYNRHINGFAAVLDQKVAEDVAIYENKGLKLHTTRSWNFLGVENDGGIPSNSLWNLSRFGESTIIGNLDTGVWPESKSFSDKEYGPIPTRWKGSCEGGSNFNCNRKLIGARYFNKGYASVAGPLNSSYETARDDNGHGTHTLSTAGGNFVEGVSIFGNGYGTAKGGSPKSLVAAYKVCWPPVEDGGCFVADILAGFEAAISDGVDVLSVSLGGRVQEFYDDILAIGSFHAVKNGITVVCSAGNSGPYEGTASNVAPWMLTVGASTIDRLFTTNVTLGDKRHFKVEGKIVVCLRGDNSRVDKGYVVAQAGGVGMILANDLLGGRALLSEAHILPASHISYTDGESVYKYIQSTKTPMAYMTSVRTELGIKPAPIMASFSSRGPNVIEPTILKPDITAPGVNILAAFSNIAPPTHSHFDKRRVLYNVLSGTSMSCPHISGIVGLLKTLYPKWSPAAIRSAIMTTAETKANDLNPILTSIEEKAGPFAYGAGHVQPNKAANPGLVYDLSTQDYLNFLCARGYNKTQMRLFTNDTSFVCSKSFKVTDLNYPSISIFDLRSKEVNIKRRVKNVGSPGTYVAKVEAPPGILVSVDPSTLKFTKSDEEKDFKVVLKRVPNNQTENHVFGKLVWSDGKHRVSSPISVTLLMW 1302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7296692 7312413 + CmoCh16G010450.1 Cmo16g01045 400080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01045 1302 ProSiteProfiles Serine proteases, subtilase domain profile. 694 1155 - -
Cmo16g01045 1302 CDD PA_subtilisin_like 270 345 - -
Cmo16g01045 1302 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 268 IPR045051 -
Cmo16g01045 1302 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 939 1299 IPR045051 -
Cmo16g01045 1302 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 611 936 IPR045051 -
Cmo16g01045 1302 Pfam Fibronectin type-III domain 1201 1297 IPR041469 -
Cmo16g01045 1302 Pfam Fibronectin type-III domain 530 613 IPR041469 -
Cmo16g01045 1302 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 53 IPR037045 -
Cmo16g01045 1302 Gene3D - 925 940 - -
Cmo16g01045 1302 Gene3D - 270 354 - -
Cmo16g01045 1302 Gene3D - 941 1024 - -
Cmo16g01045 1302 CDD PA_subtilisin_like 941 1015 - -
Cmo16g01045 1302 SUPERFAMILY Subtilisin-like 689 1159 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 CDD Peptidases_S8_3 50 450 IPR034197 -
Cmo16g01045 1302 SUPERFAMILY Subtilisin-like 52 488 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 Pfam Peptidase inhibitor I9 612 679 IPR010259 -
Cmo16g01045 1302 Pfam Peptidase inhibitor I9 6 53 IPR010259 -
Cmo16g01045 1302 ProSitePatterns Serine proteases, subtilase family, serine active site. 1086 1096 IPR023828 -
Cmo16g01045 1302 Pfam PA domain 938 1002 IPR003137 -
Cmo16g01045 1302 Pfam PA domain 258 332 IPR003137 -
Cmo16g01045 1302 Gene3D - 501 622 - -
Cmo16g01045 1302 Gene3D - 1172 1300 - -
Cmo16g01045 1302 SUPERFAMILY PA domain 939 1027 IPR046450 -
Cmo16g01045 1302 CDD Peptidases_S8_3 687 1121 IPR034197 -
Cmo16g01045 1302 Gene3D Peptidase S8/S53 domain 1025 1168 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 Gene3D Peptidase S8/S53 domain 355 497 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 Gene3D Peptidase S8/S53 domain 84 269 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 Gene3D Peptidase S8/S53 domain 721 924 IPR036852 GO:0004252|GO:0006508
Cmo16g01045 1302 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 268 - -
Cmo16g01045 1302 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 939 1299 - -
Cmo16g01045 1302 PRINTS Subtilisin serine protease family (S8) signature 791 804 IPR015500 -
Cmo16g01045 1302 PRINTS Subtilisin serine protease family (S8) signature 1085 1101 IPR015500 -
Cmo16g01045 1302 PRINTS Subtilisin serine protease family (S8) signature 718 737 IPR015500 -
Cmo16g01045 1302 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 270 611 - -
Cmo16g01045 1302 Pfam Subtilase family 82 476 IPR000209 GO:0006508|GO:0008236
Cmo16g01045 1302 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 611 936 - -
Cmo16g01045 1302 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 270 611 IPR045051 -
Cmo16g01045 1302 ProSiteProfiles Serine proteases, subtilase domain profile. 57 484 - -
Cmo16g01045 1302 Pfam Subtilase family 719 1147 IPR000209 GO:0006508|GO:0008236
Cmo16g01045 1302 ProSitePatterns Serine proteases, subtilase family, serine active site. 415 425 IPR023828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01539 Cmo16g01045 CCT
Cmo02g01539 Cmo16g01045 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00862 Cmo-Chr2:5244539 Cmo16g01045 Cmo-Chr16:7296692 1.64E-122 dispersed
Cmo16g00650 Cmo-Chr16:3205298 Cmo16g01045 Cmo-Chr16:7296692 1.04E-46 dispersed
Cmo16g00653 Cmo-Chr16:3225710 Cmo16g01045 Cmo-Chr16:7296692 1.67E-101 dispersed
Cmo16g01021 Cmo-Chr16:7060525 Cmo16g01045 Cmo-Chr16:7296692 3.50E-07 dispersed
Cmo16g01026 Cmo-Chr16:7127309 Cmo16g01045 Cmo-Chr16:7296692 0 dispersed
Cmo16g01028 Cmo-Chr16:7163748 Cmo16g01045 Cmo-Chr16:7296692 0 dispersed
Cmo16g01029 Cmo-Chr16:7180563 Cmo16g01045 Cmo-Chr16:7296692 1.38E-164 dispersed
Cmo16g01043 Cmo-Chr16:7274088 Cmo16g01045 Cmo-Chr16:7296692 2.51E-152 dispersed
Cmo16g01044 Cmo-Chr16:7285562 Cmo16g01045 Cmo-Chr16:7296692 5.14E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01045 - - csv:101212014 1422.91