Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00168 ATGGCAGCTCTTTCCAACAAATATGGCCCTCTCATGCTCCTAAAGCTTGGTCAGAAACAAGCCCTTGTGGTTTCATCACCAAAAATAGCTAAAGAAGTGATGAAGACCCATGACATCAAATTCTCCAACAGACTACAAACCACTGCCTCAAAGAAATTGCTGTACCAATGTCAAGACATTGCCTTTGTTCACTATGGGGAGTATTGGAGACAAGCCAGGAAAGTGTGCGCTCTTGAGCTTTTCAGTGTCAAAAGAGTGGACTCCTTTCAGTACCTCCAACAGGACGACATGGTTGACTATAATTTCTCTTCCGACAATCTCAAAGCAATCATACTGGACATGTTTGTTGGTGGTAGTGACACAACAGCGACAGTACTAGAGTGGACAATGACAGAGCTGATGGGAAACCCAGCAGCCATGAAGAAAGCCCAAGAGGAAGTAAGAACAATAATAGGAAAGAAATCAAAGATCGAAGCCGAAGATATTCAAAAGATGGAGTATATTCACTGTGTCATAAAAGAGTCTCTGAGGCTCCACCCGCCAGTTCCTCTGCTAGTGCCACGAGAAACAGCAGAAGATGTGGAGATCGACGGCTATCATATTCCATCAAAAACAAGAGTTTTTGTGAATGCCTGGAAAATTCAAAGGGATCCCGAGTATTGGAAGAATCCAACCGAGTTCATTCCAGAGAGGTTTATAGATAACCGTTCAGTGGATTACAAAGGCCAAGACTATGAGTTTATTCCATTTGGGAGTGGGAGAAGGAAGTGCCCAGGAATGTCATTTGGGGTTGCTTCATTTGAACAAGCATTGGCTAATCTTCTCCATTGGTTTGATTGGAAGCTTCCCAGTGGCTGTGAATTGAGCGTTGAAGAAGAAGATGGGCTCACTGTTCGCAAGAAAACCCCCCTCATTCTTAATCCAATGCCATGTTTCTAA 939 43.56 MAALSNKYGPLMLLKLGQKQALVVSSPKIAKEVMKTHDIKFSNRLQTTASKKLLYQCQDIAFVHYGEYWRQARKVCALELFSVKRVDSFQYLQQDDMVDYNFSSDNLKAIILDMFVGGSDTTATVLEWTMTELMGNPAAMKKAQEEVRTIIGKKSKIEAEDIQKMEYIHCVIKESLRLHPPVPLLVPRETAEDVEIDGYHIPSKTRVFVNAWKIQRDPEYWKNPTEFIPERFIDNRSVDYKGQDYEFIPFGSGRRKCPGMSFGVASFEQALANLLHWFDWKLPSGCELSVEEEDGLTVRKKTPLILNPMPCF 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1168228 1169685 - CmoCh18G001680.1 Cmo18g00168 401941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00168 312 Gene3D Cytochrome P450 96 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 257 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 247 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS E-class P450 group I signature 210 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 SUPERFAMILY Cytochrome P450 2 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 92 310 - -
Cmo18g00168 312 Gene3D Cytochrome P450 1 95 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 97 - -
Cmo18g00168 312 PRINTS P450 superfamily signature 117 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS P450 superfamily signature 170 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 PRINTS P450 superfamily signature 248 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 Coils Coil 140 160 - -
Cmo18g00168 312 Pfam Cytochrome P450 2 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 Pfam Cytochrome P450 91 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00168 312 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 250 259 IPR017972 GO:0005506|GO:0016705
Cmo18g00168 312 PANTHER CYTOCHROME P450 71B11-RELATED 92 310 - -
Cmo18g00168 312 PANTHER CYTOCHROME P450 71B11-RELATED 2 97 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00091 Cmo18g00168 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00166 Cmo-Chr18:1163363 Cmo18g00168 Cmo-Chr18:1168228 4.15E-101 dispersed
Cmo18g00168 Cmo-Chr18:1168228 Cmo18g00173 Cmo-Chr18:1189973 5.43E-36 dispersed
Cmo18g00171 Cmo-Chr18:1185538 Cmo18g00168 Cmo-Chr18:1168228 5.11E-42 dispersed
Cmo18g00168 Cmo-Chr18:1168228 Cmo18g00169 Cmo-Chr18:1173597 1.19E-46 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00168 K20617 - csv:101207136 363.999