Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00169 ATGGATTTCCCAACGAAGATCCACCAACAATTTCAAGCGCTCAATCCCATCTCTTCATCTCTGTGCCTTTTCTTCTTCTTCATAGTTCTGCTAAAGCTCTACAAACGCAAGAAACCCAACTTCCCTCCTTCACCACCAAGGCTACCCATCATAGGCAACCTCCATCAATTAGGTGCCCTGCCACACCAATCCATGGCAGCTCTTTCCAATAAATATGGCCCTCTAATGCTCCTAAAGCTTGGCCAGAAGCATACCCTCGTGGTTTCATCAGCAAAAATGGCTAGAGAAGTGATGAAGACCCAAGACATCAAATTCTCCAACAGGCCCCAAACTACTGCTGCATACGAATTGCTGTACCAATGTCAAGACATTGGCTTTACTCAATATGGTGAGTATTGGAGACAAGCCAGGAAAGTGTGCGCTCTTGAGCTTTTTAGTGCCAAAAGAGTGGACTCTTTTCAGTACGTAAGGGATGATGAAATTGGTGGGCTGATGGACAGGATTCGTAAGGCTTGTGTGGGCGTTGAGGCTGTGAATCTAAGCCAATTGTTTCTTCAAACCTCGAACAATATAGTGTCTAGATGTGTTTTGGGAGAGAAATTTGAAGATGAAAATGGGAATAGTAGATTTGGAGATGCAGCCAGAAAGGTTATGGTGCTAATGGTGGCGTTTTGTGTAGCTGATCTTTTTCCTTCTCTTTGGTGGATTGATACTATTAGAGGGTTCAATAAGCAGTTGGAAGATTGCTTCAAAAGATTGGATACATTTTTTAGTAAAGTGGTTGAAGAACACAAGGAAAAGATAAGAGATGGTGTTCTAACTGATGAATCTAAGAAGGATTTTGTGGATATCATGTTGCAGCTCCAACGGGATGGCATGGTTGACTATCATTTCTCTCCAATCAACCTCAAAGCAATCGTACTGGACATGTTTGTGGGAGGAAGTGACACAACAGCAACAGTACTGGAGTGGACTATGACAGAGCTGATGAGAAACCCAGCAGTCATGAAGAAAGCTCAAGAGGAAATAAGAACAATAATAGGAAAGAAATCGAAGATCGAAGCTGAAGATATTCAAAAGATGGAGTATATGCACCGTGTCATAAATGAATCTCTGAGGCTCCACCCGCCAATTCCTCTGCTAGTGCCACGAGAAACAACAACTGATGTGGAGATTGACAGCTACCATATTCCATCAAAGACAAGAGTTTTTGTGAACGCATGGAAAATCCAAAGGGATCCTGAAAATTGGCACAATCCAAACGAATTCATTCCAGAGAGATTTATGGATAACAATTCAATAGATTACAAAGGTCAAGACTATGAGTTTATTCCATTTGGGAGTGGGAGAAGGAAGTGCCCAGGATTGTCATTTGGGGCTGCTTCATTTGAACATGCATTGGCTAATCTTCTCCATTGGTTTGATTGGAAGCTTCCCAGTGACTGTGCTCTGAGCGTTGAAGAAGAAAATGGGCTCACTGTTCGCAAGAAAACCCCCCTCCTTCTTAACCCAATGCCATGTTTCTAA 1527 42.57 MDFPTKIHQQFQALNPISSSLCLFFFFIVLLKLYKRKKPNFPPSPPRLPIIGNLHQLGALPHQSMAALSNKYGPLMLLKLGQKHTLVVSSAKMAREVMKTQDIKFSNRPQTTAAYELLYQCQDIGFTQYGEYWRQARKVCALELFSAKRVDSFQYVRDDEIGGLMDRIRKACVGVEAVNLSQLFLQTSNNIVSRCVLGEKFEDENGNSRFGDAARKVMVLMVAFCVADLFPSLWWIDTIRGFNKQLEDCFKRLDTFFSKVVEEHKEKIRDGVLTDESKKDFVDIMLQLQRDGMVDYHFSPINLKAIVLDMFVGGSDTTATVLEWTMTELMRNPAVMKKAQEEIRTIIGKKSKIEAEDIQKMEYMHRVINESLRLHPPIPLLVPRETTTDVEIDSYHIPSKTRVFVNAWKIQRDPENWHNPNEFIPERFMDNNSIDYKGQDYEFIPFGSGRRKCPGLSFGAASFEHALANLLHWFDWKLPSDCALSVEEENGLTVRKKTPLLLNPMPCF 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1173597 1175800 - CmoCh18G001690.1 Cmo18g00169 401942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00169 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 506 - -
Cmo18g00169 508 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PANTHER CYTOCHROME P450 71B11-RELATED 15 506 - -
Cmo18g00169 508 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 Coils Coil 336 356 - -
Cmo18g00169 508 Pfam Cytochrome P450 42 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00169 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Cmo18g00169 508 SUPERFAMILY Cytochrome P450 42 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g00066 Cmo18g00169 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00794 Cmo-Chr13:7543201 Cmo18g00169 Cmo-Chr18:1173597 0 dispersed
Cmo14g01218 Cmo-Chr14:10363491 Cmo18g00169 Cmo-Chr18:1173597 9.33E-133 dispersed
Cmo18g00162 Cmo-Chr18:1148717 Cmo18g00169 Cmo-Chr18:1173597 7.99E-123 dispersed
Cmo18g00165 Cmo-Chr18:1158785 Cmo18g00169 Cmo-Chr18:1173597 0 dispersed
Cmo18g00169 Cmo-Chr18:1173597 Cmo18g00175 Cmo-Chr18:1203362 0 dispersed
Cmo18g00167 Cmo-Chr18:1163860 Cmo18g00169 Cmo-Chr18:1173597 9.24E-163 proximal
Cmo18g00168 Cmo-Chr18:1168228 Cmo18g00169 Cmo-Chr18:1173597 1.19E-46 tandem
Cmo18g00169 Cmo-Chr18:1173597 Cmo18g00170 Cmo-Chr18:1178747 1.67E-88 tandem
Cmo11g00066 Cmo-Chr11:310428 Cmo18g00169 Cmo-Chr18:1173597 6.59E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00169 K20617 - csv:101207136 717.227