Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00244 ATGACGAAACGTCGTCCCGCCACCGCCACCGCCACCACCACCGCCACTCTGGTCCTCGTCCTCGTCTTGTTCGAACGTTCGAAGCAGATGGCCTTAGCGGAAAATGGGGTCCCGGCGATCTTCGTGTTTGGAGACTCTCTTGTGGATGTTGGCAACAATAATTTTCTTCATTCAGCTGCTAGAGCTAACTTTTACCCTTATGGGATTGATTTTCGTGGTGGTCCGACCGGGAGATTCTCTAATGGAAGAACTGTTATAGATATGATTGTTGATTACCTTGGAATTCCGAACGCTCAAGAGTTTGCAAATCCCGATACTTCGGGAGATAGAATCCTTAAAGGTGTTAATTACGCTTCGGCGGCTGCTGGCATCCTCGATGAGACCGGTAGACACTATGGAGAGAGGTACAGTTTAAATCAGCAAGTGGTGAACTTCGAAAGCACTCGGAATGATTTAAGAAAAACAATGGACAATTGGAATTTGACTCGCTACTTATCGAGATCCATGGCTTTCATGGCGTTTGGAAGCAACGATTACATAAACAACTACCTGATGCCCAATCTCTATACTTCTAGATTCAGATACACCTCCAACCAATTCGCCGACCATCTTCTCAACAGCTATACTCGACAGCTTCTCGCACTACGAAGTGCAGGGCTAAGGAAGTTTGTGGTGGCCGGAATTGGGCCGTTGGGTTGCATTCCGAACCAACGGGCGACTGGCGTGGCGCTTCCAGGGCGGTGTGTGGATAACGTGAATGAGATGTTGGGAGATTTTAACGAAGGGTTGAGATCGCTAGTAACTCAGTTGAATAGCCAGTACCCGGATTCGTACTTCGTGTACACCAATATCTATGGCATTTTTGGTGACATCTTGAACAACCCAGATAACTACGGGTTTCGAGTGGTGGACACGGCATGCTGTGGAGTTGGGTTAAACAGAGGCCAAATAACGTGCTTACCACTCCAATTTCCATGCCTTAACCGAGATGAGTATGCGTTTTGGGATGCCTATCACCCAACGGAGGCTGCCTCCGTCGTGCTTGCCGACCGAGCTTTTAGAGGTCCACCCTCTGATTCCTACCCCATCAATATCCAACAGTTGGCTCTCCTATCCTTGTAA 1122 48.4 MTKRRPATATATTTATLVLVLVLFERSKQMALAENGVPAIFVFGDSLVDVGNNNFLHSAARANFYPYGIDFRGGPTGRFSNGRTVIDMIVDYLGIPNAQEFANPDTSGDRILKGVNYASAAAGILDETGRHYGERYSLNQQVVNFESTRNDLRKTMDNWNLTRYLSRSMAFMAFGSNDYINNYLMPNLYTSRFRYTSNQFADHLLNSYTRQLLALRSAGLRKFVVAGIGPLGCIPNQRATGVALPGRCVDNVNEMLGDFNEGLRSLVTQLNSQYPDSYFVYTNIYGIFGDILNNPDNYGFRVVDTACCGVGLNRGQITCLPLQFPCLNRDEYAFWDAYHPTEAASVVLADRAFRGPPSDSYPINIQQLALLSL 373
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 1611522 1613282 - CmoCh18G002440.1 Cmo18g00244 402017
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00244 373 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 370 - -
Cmo18g00244 373 Pfam GDSL-like Lipase/Acylhydrolase 40 350 IPR001087 GO:0016788
Cmo18g00244 373 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 16 370 - -
Cmo18g00244 373 SUPERFAMILY SGNH hydrolase 39 352 - -
Cmo18g00244 373 Gene3D SGNH hydrolase 25 355 IPR036514 -
Cmo18g00244 373 CDD SGNH_plant_lipase_like 38 356 IPR035669 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01300 Cmo-Chr9:11521885 Cmo18g00244 Cmo-Chr18:1611522 1.53E-118 dispersed
Cmo16g00933 Cmo-Chr16:5805041 Cmo18g00244 Cmo-Chr18:1611522 1.44E-68 dispersed
Cmo18g00244 Cmo-Chr18:1611522 Cmo20g01168 Cmo-Chr20:11493507 3.93E-85 dispersed
Cmo02g01215 Cmo-Chr2:7309118 Cmo18g00244 Cmo-Chr18:1611522 4.87E-39 transposed
Cmo03g00470 Cmo-Chr3:5152719 Cmo18g00244 Cmo-Chr18:1611522 4.34E-81 transposed
Cmo14g00841 Cmo-Chr14:4377722 Cmo18g00244 Cmo-Chr18:1611522 1.14E-90 transposed
Cmo10g00210 Cmo-Chr10:939620 Cmo18g00244 Cmo-Chr18:1611522 3.51E-74 transposed
Cmo13g00869 Cmo-Chr13:7920091 Cmo18g00244 Cmo-Chr18:1611522 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00244 - - csv:116402503 619.002