Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1612 ATGGCTCCTTGGTGGGGAAGAGAAAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAAAATCCCAACTGGTCAATAGTCGAAGTTGAAAGTCCTTCCGATGATGACTTCATCATCGGCGCCGAGTCGCCACCGGGTCGAGCCCCAGACAAGGGACGAGGCAAAAATGCCAAACAGCTCACTTGGGTTCTTCTTCTTAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGATCAACATCGTCGCCGCCGTTAAACGCCGTCTTGCTTCTGGAAGAACCGACGCCGACGCCGACGCCGACGCTGACAACGCCGACGGCGGCGTAAGGGAGAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATCAAGGTTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGGTGGCGGCATATTACAAAGGTTGGCATTTTAAGGCACCCCATCTTCCATTGGACTACTTATGGACAACCCCATTTGGGGTTAAGGATGTTTTTGACTGGTTTTATTCGAAATGGGTTTTGATTCGGGTTGCATATTTTGCTCCTCCTCTACAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTTATTCAGACTTTGGATAGGCTTATTCTTTGTTTGGGTTGTTTCTGGATCCGATTCAAAAAAATCAAACCTGTTCCTAAGATTGCTGCTTTTGATCTTGAGTCTGGAGAGAGTGGCTACTTCCCTATGGTTCTTGTACAAATTCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGACTCGGATGATCCAATCACCCAATTGCTGATCAAAGAGGAGGTATATAAATGGCAGCAACTCGATGCCAACATTGAATACCGACATCGAGTGATCCGAGAGGGCTATAAGGCTGGCAATCTCAAGTCTGCCATGAGTTGCAGCTATGTAAAAGACTATGAATTTGTTGCAATCTTTGATGCTGATTTTCAGCCTGCCTCGGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTTGTTCAAGCGCGATGGTCGTTCGTCAACAAAGACGAGAACTTATTAACCAGACTGCAGAACATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGCGTGTTTCTCAATTTCTTTGGATTCAATGGTACTGCTGGAGTTTGGAGGATAAAGGCGCTTGAAGAAGCCGGTGGCTGGTTGGAGAGGACCACTGTTGAGGATATGGACATTGCTGTTCGTGCTCATCTTCATGGCTGGAAATTCATATTCCTCAATGATGTTGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCACAGATGGCATTCGGGACCGATGCAACTGTTTCGACTTTGTTTGCCTGACATAGTTCGATCAAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCTTGTTCTTTCTCTTACGAAAGCTGATATTGCCATTTTATTCATTTACTCTCTTCTGCATAATTCTCCCAATGACGATGTTCGTTCCTGAAGCTGAGTTACCGGCGTGGGTTGTATGTTACATTCCAGCTACCATGTCCTTTCTCAACATCCTTCCAGCACCAAAATTCTTCCCCTTCATTGTCCCTTACCTCCTCTTTGAGAACACAATGTCAGTAACTAAGTTTAACGCAATGGTCTCAGGACTATTCCAGTTAGGTAGTGCATATGAGTGGGTCGTTACGAAGAAATCAGGCCGCTCGTCTGAGGGTGATCTTGCCTCAATGGTTGAGAAGAAAAAGCTGAACACTGAAAAGAGTGTCTCAGTAAACGACCTTGAGGAGAGTGAGTTGATCCAAAGACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACATGAAGGAACTAGCACTGGCTTTCCTTCTTCTAACAGCATCTGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGCTGTTCCAGGGTATATCCTTCCTCCTTGTCGGTCTAGACTTGATTGGCGAGCAGGTTGTTTGA 2109 44.38 MAPWWGRESHKGTPVVVKMENPNWSIVEVESPSDDDFIIGAESPPGRAPDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALINIVAAVKRRLASGRTDADADADADNADGGVRENPTVKTRFYLFIKVFLWLSVLLLGFEVAAYYKGWHFKAPHLPLDYLWTTPFGVKDVFDWFYSKWVLIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKIAAFDLESGESGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIKEEVYKWQQLDANIEYRHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLASMVEKKKLNTEKSVSVNDLEESELIQRQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27794195 27796746 - CmPI595203_08g016120.1 Cmu08g1612 423098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1612 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Cmu08g1612 702 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 173 701 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cmu08g1612 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 524 IPR029044 -
Cmu08g1612 702 Pfam Glycosyl transferase family group 2 338 546 IPR001173 -
Cmu08g1612 702 FunFam probable xyloglucan glycosyltransferase 5 237 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2701 Cmu-Chr5:35507859 Cmu08g1612 Cmu-Chr8:27794195 0.00E+00 dispersed
Cmu08g1612 Cmu-Chr8:27794195 Cmu09g0816 Cmu-Chr9:7896124 1.00E-244 dispersed
Cmu08g1612 Cmu-Chr8:27794195 Cmu08g0753 Cmu-Chr8:19840486 1.00E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1612 - - - 0.0