Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00438 ATGGCGGCGATCGCAGTGAGTAGAGCTTTGTTTCTAATGGGGTTTCTTCTGTTTCTTCAAGAAACAATGGCGGATTGTCCCTTGAACTTGAGTGGATCAAACTTTACTTTAGCTGCTTCTATTTGTTCTAACCCCAATGAAAGAGGGAAATGCTGCCGCCATATCAATGCATTTGTTGCAGTTTCTGTTGCTCAGCTTGCTAACGTGACTGGTGAACTAGGAGTTTCTTCAAACTTGTCTAACATTTGCCTGCAATCATTGTTTGAAACTATGGAACTGTATGGAGTTCCTAGAAATGCCACTGGTTTCTGTGGGGTTGGGACAAAGATTACAGTGAATTACGCGTGTAGAGGTCGAGAAACTGTCGAACAAATGCTGGAATCTCCAAGTTTCTCAAATGTTAGTGACAGTTGTGAATTGCCTCTCTTGGAGGAAAGTGTTTGCAGGAAGTGTATCAATGCTGGGATTTTGTATCTACGTAATCTGATTGGAAGAGAAGACAATATAACGTTAAATACTTGTCGCGACGCGACGTTTGTTGCACTTGCTAGCCATCTTGATACTGCTTCAGTCGTTGATCTTGCAACATGCTTCTTTGGAGTTCAAGGTCTTGACAAGCCTCCAGCTCCATCCCTTTCTTTTGCTACCCCAGATATTGCCCCAAGTCCATCAGCTGCTGCAAGTCCGGGGCCAACGATACCAGGTGTTTCCGACAATAAAAGTCATAAACGTCATTCCTACCATCTAACATTAGTGGCGGGTATTGGCATTGCGGTGACTGTGTCTTCCATATTGATTCTGGTCGTCTTGATCGTGCTGATTCGAAGGAAAAACAGAGAGCTAAAGGATTCTGATATGGCAGATGGCAAATCGTCGAAATTCTTACCTTCTCGTCCCGTCAAAAAGTATCAGGAAGGACCTTCTACGTTTAAAAAGTTCAGCTATAAAGAGATCAAGAAGGCAACAGATAGTTTTAGTACAACAATTGGACAAGGAGGATATGGAACCGTTTATAAAGCTCAATTCAGTGATGACTTAGTGGTAGCTGTGAAGAGGATGAACAAAGTCTCCGAGCAGGGGGAGGATGAATTTGGCCGAGAAATCGAGCTGCTCGCAAGATTACATCACAGACACCTTGTTGCTTTAAGAGGCTTTTGTGTTGATAAGCATGAACGGTCCTGGCAGGACGCCTCTAAGTTGGCAGACGAGAATACAAATTGCCATCGATGTCGCCAATGCTCTGGTAGTATTGCAGATTTCGGCCTTGCGCATGCTTCAGAGGGCGGTTCTATTTTCTTTGAACCTGTAAACACCGACATCTGTGGAACGCCAGGTTATATGGATCCCGAGTATGTTATCACGCAAGAGCTTACCGAGAAAAGTGATATATACAGCTACGGCGTGCTACTTTTGGAAATAGTTACTGGCAGACGTGCTATACAAGATGGTAAGAATTTAGTAGAATGGTCTCAGGTGTACATGGTTCCAGATTCAAGGATATCGGAACTAGTAGATCCAAGGATCAAGAGTTGTTTCGACTTAGAACAACTCCACACAGTCGTGTCGATTGTGAGATGGTGCACCGAGGGAGAAGGCAGGGTAAGGCCGTCAATTAAGCAGGTGCTTCGAGTATTGTACGAGAGTTCGGACCCGGTGCATCAAGAGCTGGTGGAAGCTGTTGATGAAGAAGAAGAATATGGAGGGAGTGAAGGAAGGCAGAGCATGAGCAGGAGAAAAGGGCATAGAAGTGATGTGATTTTTCACAGTGGAGAAGGAAGGTATCTTGCATCTTCATCAAGCACAACAAAGTCATATTGTAGTAGAAGCTTTTTGCTTGAAACCGGTTCACCACAATCTCCTCCCAATATTTTCTCTGTCACAGATCAATTGTTTTAG 1896 44.04 MAAIAVSRALFLMGFLLFLQETMADCPLNLSGSNFTLAASICSNPNERGKCCRHINAFVAVSVAQLANVTGELGVSSNLSNICLQSLFETMELYGVPRNATGFCGVGTKITVNYACRGRETVEQMLESPSFSNVSDSCELPLLEESVCRKCINAGILYLRNLIGREDNITLNTCRDATFVALASHLDTASVVDLATCFFGVQGLDKPPAPSLSFATPDIAPSPSAAASPGPTIPGVSDNKSHKRHSYHLTLVAGIGIAVTVSSILILVVLIVLIRRKNRELKDSDMADGKSSKFLPSRPVKKYQEGPSTFKKFSYKEIKKATDSFSTTIGQGGYGTVYKAQFSDDLVVAVKRMNKVSEQGEDEFGREIELLARLHHRHLVALRGFCVDKHERSWQDASKLADENTNCHRCRQCSGSIADFGLAHASEGGSIFFEPVNTDICGTPGYMDPEYVITQELTEKSDIYSYGVLLLEIVTGRRAIQDGKNLVEWSQVYMVPDSRISELVDPRIKSCFDLEQLHTVVSIVRWCTEGEGRVRPSIKQVLRVLYESSDPVHQELVEAVDEEEEYGGSEGRQSMSRRKGHRSDVIFHSGEGRYLASSSSTTKSYCSRSFLLETGSPQSPPNIFSVTDQLF 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2522297 2527875 + Cp4.1LG01g02310.1 Cpe01g00438 461751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00438 631 ProSiteProfiles Protein kinase domain profile. 247 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00438 631 MobiDBLite consensus disorder prediction 566 581 - -
Cpe01g00438 631 Pfam Protein kinase domain 417 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00438 631 Pfam Protein kinase domain 327 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00438 631 SUPERFAMILY Protein kinase-like (PK-like) 302 550 IPR011009 -
Cpe01g00438 631 MobiDBLite consensus disorder prediction 559 581 - -
Cpe01g00438 631 Gene3D Transferase(Phosphotransferase) domain 1 398 567 - -
Cpe01g00438 631 Gene3D Phosphorylase Kinase; domain 1 288 393 - -
Cpe01g00438 631 PANTHER OS01G0750732 PROTEIN 15 392 - -
Cpe01g00438 631 PANTHER OS01G0750732 PROTEIN 416 626 - -
Cpe01g00438 631 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Cpe01g00438 631 PANTHER BNAC06G02630D PROTEIN 15 392 - -
Cpe01g00438 631 Pfam SPARK 24 156 IPR043891 -
Cpe01g00438 631 PANTHER BNAC06G02630D PROTEIN 416 626 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00438 Cpe14g00292 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00438 Cpe-Chr1:2522297 Cpe17g01101 Cpe-Chr17:8356990 5.94E-40 dispersed
Cpe01g00438 Cpe-Chr1:2522297 Cpe14g00292 Cpe-Chr14:1714613 2.47E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62111 PF00069 Pkinase 1.80E-13 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00438 - - csv:101219079 959.903