Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02111 ATGGATTTCGTTGAAGGTGTTGGAGAGAGTTCTTCGCCGCCTCGAAGCTTTGGTGCCTTCTGTGGTGTCCACGATATTCGGAACGATGTTTATACTCGGTTGGTTGAGAGTGGACATGAGGAGGCCGCTTCTAATCCACTGTTTCGTGAGAACTTGGATGCACACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTTAACATGGAAAAGGTGGAAGATGTTGTGTTACATCAAAATCTTCTTTCTCTAGCAAAGGATCCAGAGAAGTGCCCTGTTTACCACATTCGCTTTCTCGAGCACATATGTACTAAAACAGATGGCAATGACGATGAAGAACTTGATAGTATTCTTCTAAGTGGTTCATCTAATGAGGCAGCTGATAAAAGTTTTCCAGTGTCACACAAGAGAATAAGGGGCAATATACTTGACTTTGAGCCTTGTTCCAAGCTTGAGGACTTAAAACTGGATGTTAGAAAGAACTCAAAGGCCATGGATGGGAGATATCATATGGAAAGTTTTTCTAAAAGGCAGGGTATTTCACACGTACCGGTACATGAAGTGATATTTTCAACTGTTGACAAGCCTAAGCTTCTTAGCCAGCTGTCTGCTTTGCTTTCTGATATAGGACTTAACATTCGAGAAGCACATGTGTTTTCAACATCTGATGGTTACTCCTTGGATGTATTTGTGGTGGATGGATGGCCTGCTGAGGAAACTGATGGCTTGTACGAAGCTATGGAAAAAGCAGTTGCTAGATATGAGGGGTCGTGGTCTGGTTCTTCACACTCTCATTCAGCAGTCAAGAAAGCATTAGACGCCCAGACAAAATCAGCAGATTGGGAAATAGATAGACGGTTGCTGAAGATTGGAGAAAAAATTGCAACTGGATCTTGTGGTGATTTGTATCATGGACTATATCTTGGTCAAGATGTAGCTGTCAAGATATTAAGATCAGAAGATCTAAATGCTGATTTAGAGGATGAATTCAATCAAGAAGTGGCAATTCTCAGGAAGGTCCAGCATAAAAATGTAGTTCGTTTTATAGGTGCATCTACAAACTCTCCACATTTGTGTATAGTAACAGAGTATATGCCTGGAGGGAGTCTTTATGAGTACTTGCACAAGAATCATTGCGTGTTACAGCTGTCGCAACTGCTGAAGTTTGCTATTGATGTTTGTGAAGGAATGGCATACTTACATTTAAATAACATTATTCATAGAGATTTGAAGACAGCAAATCTGCTAATGAACACTGAACATGTTGTAAAGGTGGCAGATTTTGGTGTCGCGCGATTCCAGAGCCAAGGAGTCATGACAGCGGAAACTGGAACATATAGATGGATGGCGCCTGAGGTGATAGATCTGTCAGTGGATATTCTGTACATGAGACCAGAAGTTCCTTATGATTCATTGACACCGCTACAAGCTGCCCTAGGAGTAAGACAGGGACTACGCCCGGATCTTCCCGAAAATGTGCACCCTAAAGTATTGGATTTGATGCAAAGATGCTGGGATGCAGATCCGGTCAATCGGCCTCCATTTACTGTGATAAAAGTTGAACTTCAAAATCTCCTGGAAGAAGTTCAGATGTGTACAAAATATGAAGAAAATCATGCAGCGGTTAATGGGAGCTGA 1638 41.94 MDFVEGVGESSSPPRSFGAFCGVHDIRNDVYTRLVESGHEEAASNPLFRENLDAHFNRLPPSYGLDVNMEKVEDVVLHQNLLSLAKDPEKCPVYHIRFLEHICTKTDGNDDEELDSILLSGSSNEAADKSFPVSHKRIRGNILDFEPCSKLEDLKLDVRKNSKAMDGRYHMESFSKRQGISHVPVHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTSDGYSLDVFVVDGWPAEETDGLYEAMEKAVARYEGSWSGSSHSHSAVKKALDAQTKSADWEIDRRLLKIGEKIATGSCGDLYHGLYLGQDVAVKILRSEDLNADLEDEFNQEVAILRKVQHKNVVRFIGASTNSPHLCIVTEYMPGGSLYEYLHKNHCVLQLSQLLKFAIDVCEGMAYLHLNNIIHRDLKTANLLMNTEHVVKVADFGVARFQSQGVMTAETGTYRWMAPEVIDLSVDILYMRPEVPYDSLTPLQAALGVRQGLRPDLPENVHPKVLDLMQRCWDADPVNRPPFTVIKVELQNLLEEVQMCTKYEENHAAVNGS 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17859216 17873622 - Cp4.1LG01g21170.1 Cpe01g02111 463424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02111 545 ProSiteProfiles Protein kinase domain profile. 288 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02111 545 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 535 - -
Cpe01g02111 545 SMART serkin_6 288 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02111 545 Gene3D Transferase(Phosphotransferase) domain 1 366 543 - -
Cpe01g02111 545 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 535 - -
Cpe01g02111 545 Pfam Protein tyrosine and serine/threonine kinase 288 521 IPR001245 GO:0004672|GO:0006468
Cpe01g02111 545 CDD STKc_MAP3K-like 294 518 - -
Cpe01g02111 545 SUPERFAMILY ACT-like 186 257 IPR045865 -
Cpe01g02111 545 Gene3D Phosphorylase Kinase; domain 1 273 365 - -
Cpe01g02111 545 ProSiteProfiles ACT domain profile. 187 261 IPR002912 -
Cpe01g02111 545 SUPERFAMILY Protein kinase-like (PK-like) 276 525 IPR011009 -
Cpe01g02111 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02111 Cpe13g00675 CCT
Cpe01g02111 Cpe02g00053 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02111 Cpe-Chr1:17859216 Cpe14g01045 Cpe-Chr14:8766023 8.84E-150 dispersed
Cpe01g02111 Cpe-Chr1:17859216 Cpe13g00675 Cpe-Chr13:6349189 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62178 PF07714 PK_Tyr_Ser-Thr 3.00E-52 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02111 - - mcha:111011813 963.755