Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00460 ATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGACAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCAGCCGGCGGCACTTCAGCGTCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATTCGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACATACTAAAGAACACAACAACCAACAAGAGAAGTGATGGGGACACTGCTAATGCAAACCAGGCTGTATAG 417 47.0 MICFFTEDIGVGSDEEETSRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQAV 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2612716 2616385 - Cp4.1LG02g04130.1 Cpe02g00460 464409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00460 138 CDD bZIP_HY5-like 61 112 - -
Cpe02g00460 138 Coils Coil 83 117 - -
Cpe02g00460 138 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 121 IPR004827 GO:0003700|GO:0006355
Cpe02g00460 138 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 13 127 - -
Cpe02g00460 138 Coils Coil 55 75 - -
Cpe02g00460 138 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 13 127 IPR044280 GO:0000981|GO:0045944
Cpe02g00460 138 MobiDBLite consensus disorder prediction 1 78 - -
Cpe02g00460 138 Gene3D Single helix bin 79 120 - -
Cpe02g00460 138 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Cpe02g00460 138 MobiDBLite consensus disorder prediction 50 78 - -
Cpe02g00460 138 Pfam bZIP transcription factor 57 117 IPR004827 GO:0003700|GO:0006355
Cpe02g00460 138 SUPERFAMILY Leucine zipper domain 60 118 IPR046347 GO:0003700|GO:0006355
Cpe02g00460 138 MobiDBLite consensus disorder prediction 20 37 - -
Cpe02g00460 138 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00460 Cpe07g00288 CCT
Cpe02g00460 Cpe11g00334 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00460 Cpe-Chr2:2612716 Cpe08g01349 Cpe-Chr8:9718011 6.48E-06 dispersed
Cpe11g00334 Cpe-Chr11:1775675 Cpe02g00460 Cpe-Chr2:2612716 2.64E-45 wgd
Cpe02g00460 Cpe-Chr2:2612716 Cpe07g00288 Cpe-Chr7:1900392 3.80E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49005 PF00170 bZIP_1 7.00E-12 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00460 K16241 - csv:101205952 194.897