Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00781 AACCCACGGAGGTTAGTTGGCCATTTCAGTCGAACGCCGCCACACCGGTGCTCTCTTCTTCCTGCCATTGCCAATTCAATCAAAGCTCGAAATCTCCGTCGTCCAGACTTCACGGGTACAGTTCCTGCCGGCAGTGTAGTTCCACTGATTTTAATGGAAGCACCGCCATTCTCTATCGCTGTTTCTTCTTCTCGAACTGTAATTCGATCATTTCCGTCGTCGTTTCATACCAGCTCTCTCGTTTTTCTTCGCAATAATCGTTACAAAACTTGTCATCTCAAAGTTAAGTCCACCGGTAAGTTTGCGGTTCGTGCCTCATTTTCGGGTGACTCAGTCGTGACTTTGCTGGATTACGGTGCTGGTAATGTTCGTAGTGTGAGGAATGCAATTCGTTACCTTGGCTTCGACATTAAAGATGTGCAAACTCCAGAGGACATTCTGAATGCAAAACGCCTAATATTTCCTGGAGTTGGGGCATTTGCTCCAGCCATGGATGTGCTAAACAATAAAGGAATGGCTGAAGCACTCTGTACTTATATTGAGAATGATCGCCCATTTTTAGGCATTTGTCTTGGGCTTCAATTACTCTTCGAATCAAGTGACGAGAATGGACCAGTAAAAGGACTTGGCTTAATACCGGGTGTGGTTGGGCGTTTCGACTCTTCCAATGGTTTTAGTGTACCCCATATTGGGTGGAATGCTTTGGAAATCTCAGATGACTCTGAGATCTTGGATGATATTTGTAATCGTCATGTCTACTTTGTTCACTCTTACCGTGCTATGCCATCTGACAAGAACAAGGAGTGGATCTCTTCTACTTGCAGCTATGGTGACAGGTTTATAGCCTCAGTTAGAAGGGGAAATGTCCATGCAGTTCAATTCCACCCAGAAAAGAGTGGAGATGTAGGCCTGTCTGTCCTCAGAAGATTCTTGCTTCCAAAGTCAACTTTGACCAAGAAACCTACTGAGGGGAAGGCATCAAGGCTTGCAAAAAGGGTAATTGCTTGTCTTGATGTGCGGACAAATGATCAAGGGGATCTTGTTGTTACCAAAGGGGACCAATATGACGTAAGGGAGCAATCAGAAGAGAATGAGGTGAGGAACCTTGGCAAACCGGTTGAGCTTGCTGGACAATACTACAAGGATGGAGCTGACGAGGTCAGTTTTTTGAATATAACTGGTTTCCGTGACTTCCCTCTTGGCGACTTGCCAATGTTGCAGGTGCTGAGATACACATCAGAAAATGTTTTTGTACCATTGACTGTTGGTGGCGGAATTAGAGATTTTACGGATGCAAATGGCAGACACTATTCTAGCTTGGAAGTTGCTTCAGAATATTTCAGATCTGGAGCTGATAAAATATCTATCGGAAGTGATGCAGTTTATGCTGCTGAGGAATATTTAAGAACTGGTGTAAAGACTGGAAAGAGCAGCTTGGAACAGATTTCTACTGTTTATGGAAATCAGGCTGTCGTGGTAAGTATTGATCCTCGAAGAGTGTACCTTAAAAGTCCTGATGATGTGGAGTTCAAAGTCATTCGAGTTACTAACCCAGGTCCTAATGGAGAAGAATATGCATGGTATCAGTGTACAGTGAATGGAGGTCGAGAAGGTCGACCTATTGGAGCTTATGAGCTTGCAAAAGCAGTTGAGGAGCTTGGAGCTGGAGAAATACTGCTAAATTGCATAGATTGTGATGGTCAAGGAAAAGGATTTGATTTAGATCTAGTAAAGCTGATATCGGATTCTGTGAGCATCCCTGTTATTGCCAGCAGCGGTGCTGGGTGTTCTGACCATTTCTCAGAGGTGTTTAACAAGACAAATGCATCTGCTGCCTTAGCTGCTGGCATTTTCCATCGCAAGGAGGTATTCCCTGAGATCCCTTTATCTTAG 1893 44.27 NPRRLVGHFSRTPPHRCSLLPAIANSIKARNLRRPDFTGTVPAGSVVPLILMEAPPFSIAVSSSRTVIRSFPSSFHTSSLVFLRNNRYKTCHLKVKSTGKFAVRASFSGDSVVTLLDYGAGNVRSVRNAIRYLGFDIKDVQTPEDILNAKRLIFPGVGAFAPAMDVLNNKGMAEALCTYIENDRPFLGICLGLQLLFESSDENGPVKGLGLIPGVVGRFDSSNGFSVPHIGWNALEISDDSEILDDICNRHVYFVHSYRAMPSDKNKEWISSTCSYGDRFIASVRRGNVHAVQFHPEKSGDVGLSVLRRFLLPKSTLTKKPTEGKASRLAKRVIACLDVRTNDQGDLVVTKGDQYDVREQSEENEVRNLGKPVELAGQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFTDANGRHYSSLEVASEYFRSGADKISIGSDAVYAAEEYLRTGVKTGKSSLEQISTVYGNQAVVVSIDPRRVYLKSPDDVEFKVIRVTNPGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDLDLVKLISDSVSIPVIASSGAGCSDHFSEVFNKTNASAALAAGIFHRKEVFPEIPLS 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4975137 4982891 - Cp4.1LG02g00910.1 Cpe02g00781 464730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00781 630 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 124 623 - -
Cpe02g00781 630 Gene3D Aldolase class I 334 626 IPR013785 -
Cpe02g00781 630 CDD HisF 331 623 IPR004651 GO:0000105|GO:0000107
Cpe02g00781 630 CDD GATase1_IGP_Synthase 113 311 IPR010139 GO:0000105|GO:0016763
Cpe02g00781 630 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 124 623 - -
Cpe02g00781 630 Gene3D - 109 333 IPR029062 -
Cpe02g00781 630 SUPERFAMILY Class I glutamine amidotransferase-like 112 311 IPR029062 -
Cpe02g00781 630 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 112 313 IPR010139 GO:0000105|GO:0016763
Cpe02g00781 630 Pfam Histidine biosynthesis protein 332 622 IPR006062 GO:0000105
Cpe02g00781 630 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 113 311 IPR010139 GO:0000105|GO:0016763
Cpe02g00781 630 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 112 320 - -
Cpe02g00781 630 Pfam Glutamine amidotransferase class-I 115 310 IPR017926 -
Cpe02g00781 630 SUPERFAMILY Ribulose-phoshate binding barrel 328 624 IPR011060 -
Cpe02g00781 630 PIRSF IGPS_HisHF 110 626 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00781 Cpe06g00777 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00781 Cpe-Chr2:4975137 Cpe06g00777 Cpe-Chr6:4906718 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00781 K01663 - csv:101205184 1048.88