Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01711 ATGCGTAATTCGATCCCACAGCCTTCTTCCCCCATCCGTGCGGTGGATAATTCGCCTCTGCTCGCGCACTCCGTCGCCGATGGCCTTTTCCGTTCGCGAGGGTTTATTCGCCGTTCGCCTCAACCTCTTCGCGGAGCGGTTCGTCTTCTCCGCCGTGCAAGTGGCCGGCAGATGATGCTTCGAGAATCCTCCGTTCGTGTCCGCGAGAACGCCGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCGTACTCAAAGCCGATTATCCTTTTGGACCTTCTATGGAACTTGGCCTTCGTCGCCATTAGTTTCACTGTCATAGGGCTCAGCACGAGTGAAAAACCTTCAGTGCCGCTCAGATTTTGGATCATTGGATATGCTATGCAGTGTATAATTCACATGTCCTGTGTAGCTACAGAGTATAAGCGGCGGCGCTCAACAAGAGAGCTCGTCGGATTGGACCGTAGCGGTGGCTGGACGAGCAGCGAGGATTCAAATTCGATATCCGGAAGCGATGGCGATGATTATGCGACCGAGCTCACTGTGAATGACGATGAACCGAGCAATCTTGTGAAGCATATTGAGTCTGCAAATACCATGTTCTCTTTCATTTGGTGGCTGTTGGGCTTTTATTGGGTAACTGCTGGAGGCCAAGAATTGATAGATGATTCACCTCAGCTATACTGGCTTTGTATTACATTCCTTGCTTTCGACGTCGTATTTGTTCTGATTTGTGTTGCCATTGCGTGTCTTGTTGGTGTTGCAATTTGCTGCTGTCTGCCTTGCATAATTGCCATCTTGTATGCGGTTACCGATCAGGAGTGTTGCATCTGCCTCTCTGCTTACGAAAACGGAACCGAGCTACGAGAACTTCCCTGTAACCACCATTTTCACTGCAACTGCATCGACAAATGGTTGCACATGAATGCTACCTGCCCTCTCTGCAAGTTCAACATCTTGACGCCGAACGGTTCCGGTAGCGAAGAAGTGTGA 993 50.96 MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYAMQCIIHMSCVATEYKRRRSTRELVGLDRSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAILYAVTDQECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILTPNGSGSEEV 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13000644 13003858 + Cp4.1LG03g16990.1 Cpe03g01711 467428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01711 330 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 274 - -
Cpe03g01711 330 ProSiteProfiles Zinc finger RING-type profile. 275 316 IPR001841 -
Cpe03g01711 330 MobiDBLite consensus disorder prediction 158 173 - -
Cpe03g01711 330 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 272 323 - -
Cpe03g01711 330 SUPERFAMILY RING/U-box 269 322 - -
Cpe03g01711 330 SMART ring_2 275 315 IPR001841 -
Cpe03g01711 330 MobiDBLite consensus disorder prediction 154 173 - -
Cpe03g01711 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 322 IPR013083 -
Cpe03g01711 330 CDD RING-H2_RNF111_like 274 318 - -
Cpe03g01711 330 Pfam Ring finger domain 274 316 IPR001841 -
Cpe03g01711 330 PANTHER TARGET OF ERK KINASE MPK-1 1 274 - -
Cpe03g01711 330 PANTHER TARGET OF ERK KINASE MPK-1 272 323 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01711 Cpe08g00516 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01711 Cpe-Chr3:13000644 Cpe08g00793 Cpe-Chr8:6289601 3.65E-101 dispersed
Cpe03g01711 Cpe-Chr3:13000644 Cpe08g00516 Cpe-Chr8:3336974 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01711 - - cpep:111786609 538.495