Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00298 | ATGGCTCTACACCCACATGAACACACAACCCAACGCCACCACAACACTCTCTTCTTCCTCCACTGCACACACCAACAGCACCAACAACAACAACAACACCTGCAAACAGAGGACCCCATTTTCCACGACAATGGCGGCACCCACTTTCTGGAACAGACGACCCATTTCGTTGCTTGCGAAGATGAAGAGCTTGGTTATCTGTTAGCCAAAGAACGAGATCAGAATCTCGTTTTGGAGCGCTTAATTGAAAGAGACGCAGCTCTGTCTCTGGCTAGAACAGAGGCCATCGAGTGGTTGCTTAAAGTTAATACCTTTTATGGCTTCTCCTCTGTCACCGCTCTCTTAGCCATTAATTACCTCGATCGAATCCTCTCTGGTCCTCATTTTCAAAGAGACAAGCCATGGTTGCTTCAGCTTCTTGCAGTAACTTGCATCTCTTTAGCAGCCAAAGTCGAAGAAATTCGTGTTCCTCTTCTTCTTGATCTCCAGGTGGAAGATTCAAAGTTCATATTTGAGCCAAAAACGATACAAAGAATGGAGCTTTTGGTGCTGAGTGGTCTGAAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTGTAACGAAGCGGCTTGGGTTGAAGAATCAGTGCATTGAGAGGGAGTTTTTCCGGCGCTGTGAGCGTATTCTTCTCTCTCTCGTCTCTGATTCGAGATCAGTGGGGTTTCTTCCTTCTGTGATGGCTGTATCGGCAATGGTGAGCGTTGTTGAAGAGATGGGTGACTGTAACTGTTACTGTAACCCATTGGACTTTCAGGATCGCCTTCTTAATGCCCTCAAAATAACCAAGGAAAGATCGAGGAAATGCTGCAACGTGATAAGGGAGATAACGAAACGGGAAACGAAAGCGAACCGATCAGGAAAGAAGAGGAAGCAGAACGAGGAGGACGAGGGAGAGGAAGAAGAAGACGACGACGAAGAGAGATCAAGAACATCATTAGAAACCGAAACAGAATCAGAATCAGAAGGAGGAGGAAGCCCAAATGGAGTAATGGAAGGCAATTTCAGCTGTGAAAGCTCCGATGATTCGTGGGGCATAGAAGAAGTCACAAGGTGTTGTTGTTCCAAAAGAACTAAAAGCAGTGAAGAATCATGA | 1143 | 46.11 | MALHPHEHTTQRHHNTLFFLHCTHQQHQQQQQHLQTEDPIFHDNGGTHFLEQTTHFVACEDEELGYLLAKERDQNLVLERLIERDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWLLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIVTKRLGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCYCNPLDFQDRLLNALKITKERSRKCCNVIREITKRETKANRSGKKRKQNEEDEGEEEEDDDEERSRTSLETETESESEGGGSPNGVMEGNFSCESSDDSWGIEEVTRCCCSKRTKSSEES | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3757790 | 3760173 | + | Cp4.1LG04g07870.1 | Cpe04g00298 | 467860 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00298 | 380 | PANTHER | CYCLINS | 45 | 353 | IPR039361 | - | |
Cpe04g00298 | 380 | SMART | cyclin_7 | 97 | 185 | IPR013763 | - | |
Cpe04g00298 | 380 | CDD | CYCLIN | 92 | 184 | IPR013763 | - | |
Cpe04g00298 | 380 | ProSitePatterns | Cyclins signature. | 92 | 123 | IPR006671 | - | |
Cpe04g00298 | 380 | PANTHER | CYCLIN-D3-1 | 45 | 353 | - | - | |
Cpe04g00298 | 380 | MobiDBLite | consensus disorder prediction | 297 | 360 | - | - | |
Cpe04g00298 | 380 | Gene3D | - | 193 | 286 | - | - | |
Cpe04g00298 | 380 | Pfam | Cyclin, N-terminal domain | 77 | 191 | IPR006671 | - | |
Cpe04g00298 | 380 | Pfam | Cyclin, C-terminal domain | 194 | 312 | IPR004367 | - | |
Cpe04g00298 | 380 | Gene3D | - | 89 | 192 | - | - | |
Cpe04g00298 | 380 | MobiDBLite | consensus disorder prediction | 297 | 311 | - | - | |
Cpe04g00298 | 380 | SUPERFAMILY | Cyclin-like | 54 | 192 | IPR036915 | - | |
Cpe04g00298 | 380 | Coils | Coil | 304 | 324 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00298 | Cpe14g00286 | CCT | |
Cpe01g00427 | Cpe04g00298 | CCT | |
Cpe01g00427 | Cpe04g00298 | ECH | |
Cpe04g00298 | Cpe14g00286 | ECH | |
Cpe04g00298 | Cpe15g00473 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00298 | Cpe-Chr4:3757790 | Cpe14g00286 | Cpe-Chr14:1670885 | 6.83E-89 | dispersed | |
Cpe01g00427 | Cpe-Chr1:2468894 | Cpe04g00298 | Cpe-Chr4:3757790 | 1.10E-84 | wgd | |
Cpe11g00137 | Cpe-Chr11:738016 | Cpe04g00298 | Cpe-Chr4:3757790 | 5.17E-74 | wgd | |
Cpe15g00473 | Cpe-Chr15:5737985 | Cpe04g00298 | Cpe-Chr4:3757790 | 4.74E-147 | wgd | |
Cpe19g00642 | Cpe-Chr19:5181481 | Cpe04g00298 | Cpe-Chr4:3757790 | 2.86E-67 | wgd | |
Cpe02g00199 | Cpe-Chr2:1031220 | Cpe04g00298 | Cpe-Chr4:3757790 | 3.76E-47 | wgd | |
Cpe04g00298 | Cpe-Chr4:3757790 | Cpe06g00180 | Cpe-Chr6:976067 | 2.06E-69 | wgd | |
Cpe04g00298 | Cpe-Chr4:3757790 | Cpe07g00498 | Cpe-Chr7:3257734 | 3.51E-69 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00298 | K14505 | - | csv:101222066 | 421.009 |