Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00160 ATGGAGCTATTCCCTGCACAGCCAGATTTGTCGCTCCAAATTAGCCCTCCCAATACAAATAAACCCTCTTCCACTTGGAGAACAACAACACCCTCTCAAGAACATCTTGATTTGGGGTTTTGGAATAATCTCAATTTGGAGTCTGCTAAACCCACTCCCAAACATCACCCTACTAATCAACACTTTGATCTCTCCCTTTCCAACTTCACTCAAATTAACCAATACTCCAATATTCCTCCTCCTCCGCCTCCTCCTCTTCCTCACCACCACCACCCTGCCTTCCACGGCGGCGCTCACCTCTTCCAAACCCTACACAAAACCCACCACCCACCCACCATTTTCCACCACACTCCTCCGCCACCACCCACCACATCGCACCCTTTTCCAGGACAGAACAATGTTCAAGACTTGGCCTTTTTGCGACCCATTAGAGGAATTCCGGTGTACCATCAGACAACTAACCCCGCCGGCACTCCCTCCGCCAGCGGCCACGGCCAGATAATGATGCGATCCAGATTCTTGTCTAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCAAGGATGCGATGGACATCCACTCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGCGGCCATGAAAGAGCGACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGGGACACGAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAAGCATGGGAAGGCAAAATGAGCACTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGATAAGGATTATCATGCCCTCTGGAGCAATTCTTCCAGGGAAGCTTGGTTGCATGGTTTTCCTAATGATTCTTCTAGGGACCTTTCATCGTCCCTCGAGAATGACGTGGATCCAAAGAGCTCAAACAACGAGAGACTATCGGAAATAAGCTCGTCGGGGAATCTTCTTCCTGAGAAGCCTAATTTGGAATTCACATTAGGAAGGGCAGTTTGA 1068 48.5 MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNQHFDLSLSNFTQINQYSNIPPPPPPPLPHHHHPAFHGGAHLFQTLHKTHHPPTIFHHTPPPPPTTSHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSASGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLLPEKPNLEFTLGRAV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 852093 856684 - Cp4.1LG05g00160.1 Cpe05g00160 469365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00160 355 Gene3D - 185 242 - -
Cpe05g00160 355 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 353 IPR044847 GO:0000976|GO:0006355|GO:0010158
Cpe05g00160 355 MobiDBLite consensus disorder prediction 1 31 - -
Cpe05g00160 355 MobiDBLite consensus disorder prediction 11 31 - -
Cpe05g00160 355 SUPERFAMILY Homeodomain-like 183 239 IPR009057 -
Cpe05g00160 355 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 186 239 IPR006447 GO:0003677
Cpe05g00160 355 MobiDBLite consensus disorder prediction 309 344 - -
Cpe05g00160 355 MobiDBLite consensus disorder prediction 72 95 - -
Cpe05g00160 355 MobiDBLite consensus disorder prediction 328 343 - -
Cpe05g00160 355 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01479 Cpe-Chr2:12725695 Cpe05g00160 Cpe-Chr5:852093 3.28E-53 dispersed
Cpe05g00160 Cpe-Chr5:852093 Cpe20g00167 Cpe-Chr20:945976 7.43E-40 dispersed
Cpe06g00132 Cpe-Chr6:699448 Cpe05g00160 Cpe-Chr5:852093 1.45E-28 dispersed
Cpe01g01981 Cpe-Chr1:16933603 Cpe05g00160 Cpe-Chr5:852093 8.23E-31 transposed
Cpe14g00982 Cpe-Chr14:8301898 Cpe05g00160 Cpe-Chr5:852093 9.27E-10 wgd
Cpe15g00191 Cpe-Chr15:1569966 Cpe05g00160 Cpe-Chr5:852093 2.39E-146 wgd
Cpe05g00160 Cpe-Chr5:852093 Cpe08g00875 Cpe-Chr8:6906942 1.06E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49480 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00160 - - bhj:120077162 504.982