Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00576 ATGGCAATTAATTTCTCCCTCTTTTTCTGCTCCTGCTCCTTCGTTTCTGATCACGCCGCCGCCTCCGAATCCGACGACTGTGAAATGGCTGAGGCCGTGGTGGCGACTTCTGAGGATGCCGTGGTGGCGACTTCTGAGGATGTGGATTTTGGTTATGCGACGGCCGAGATCGAGAACAATAGAGAAAGCAGTTCAAATGGACTTGGGATTGGGATCAAGTGGGAGTGCCTTTTGCCCAAGGTTATGCTCAGGGTCTTGCTCGTTGAAGCGGACGATTCCACCAGACAGATTATCACTGCTCTTCTCCGCAAGTCCTGCTACCGAGTTGCTGCTGTTCCTGATGGCATGAAAGCGTGGGAGATTCTTAAAGCAAGGCCCCGTAATGTAGATCTTATATTGGCGGAAGTTGAATTACCATCAATGTCTGGATTTTCTCTGCTAACTCTGATCATGGGGCACGAGACTTGCAAAAATATTCCTGTTATAATGATGTCATCTGAAGATTCTATCAGCACCGTTTATAAATGCATGATGAAAGGTGCAGCAGACTATCTTGTTAAGCCCTTAAGGAGAAATGAACTGAGTCATCTGTGGCAACATGTTTGGAGAAGACAAGCATCATCCAATGTAAGAACTGACATTCAAGAAAAGGTTGAAGTCACTTCAGAAAATGAGACTGCAAGCAACCACTCCACTGATTATGTTGCTGGAGTTGAGAGGAATGATAACAACACTGAGAAAGGGAGTGATACTCAGAGCTCTTCTACAAAGGTAGATTTTGAGGCTGGTAGTAAGATGCAGGAAAGTTCACAGCCGAGGCAGGAAAAAGCCTCTTCAAATGACTTCAAGCTACAGAAAGATGGGGGTCACATCAATTTGAGTCAGAGATTGGCTATACATGAAAATGAATCTGGAGGATTGGCAATGAGTTGCTATGCCAATGATGATTTACCAATTACACTTAGCATGGGTCTTGAGCCGACCAATGATGGGAGAAGTCCTTATATTGCTAGTGAAGCAGAGGATTTGCTTGCCAACCCATCTAGAGATGCAACTGCGTTGAATCATGCCTGTATCAATTATCCCGATGACTACCAAAGAAGATCTCCTTCCACTGTTGCTGCCACAAACAATTTCGGCTCTGCTCTTCATTTGGATCTTTCCCTAAGAAGATGTCAACCGAATGATTTTGAGGACCGTGCTGCAGAAGGACGAGCTACCCTCAAACATTCCAGTGCTTCAGCTTTTACAAGATACACTTCCAGGCCATTGCAAACACTTCCAGCAAAATCAAGCAGTATCTGTGATGAACAAAAAGAATTTGGAAGCAATCCCGAGCATATTGGAAGTATTGCTGCTACTCCTACCTCTGATACCATTAATACTACGCTAAGTCTGCAAAACAGTAATACTTCTATGCCCCTGATGACAAGTCTATCTGCTCTCTCTGAAGTTGCAAAATCAAGTACTTCAGAGACAGAAACCCCTCATCAAGTTACAGTGAAAGATTTGATGTCTAGTAGTCAATGCTCGGGCCATGGCTCTTTACTTTCTCCCAACTTGTGCACACAAGGGGGGGGTGCGTCATCGTCTCCATGCTCAACTTTAGTCACTCATCCCGAACCCATCTTGGCAAAACAGACAGTTTATCCCCTAAACCTTGAGAATCATAATTTGGAGCAGTTTCTGAACCAGCATCCCAACACAAGTGATCCAGGAAGCCGAAAGTTAGAGAACTCAGGGAAGAAGTTGGAGTATGCAGAAAATCAAGGCCATATATCACCTACCACTGATCACAGTGCAAACAGTAGTCTATGTGGTGGTAACACAAGTCATGTTCGAAGCGTGGGATATCCTAGCACATGCGGAAGCAACAACAATGTCGACCGGGTTGGCATTGCTGCAAGGGTTACATCTGAGAGCAAAAATGAAGAAGCTTTGTCTTATCAAGGAGGAGATCCTCACCGGAGCAGTCAAAGAGAAGCAGCTCTAACAAAGTTCCGACTGAAGCGAAAAGATCGATGTTATGATAAAAAGGTGCGTTATGAGAGCAGGAAAAAGCTGGCAGAACAGCGTCCTAGAGTGAAGGGTCAGTTTGTCCGTAGAGTATACACTGATGATCCATTGCCTGCAGAAAGCAACGTCAATACATCCAACGGACACCCAAATCCCATTGAATATCCCTTCCCTCTGTTCTTCCCTGCTAATTAA 2211 44.87 MAINFSLFFCSCSFVSDHAAASESDDCEMAEAVVATSEDAVVATSEDVDFGYATAEIENNRESSSNGLGIGIKWECLLPKVMLRVLLVEADDSTRQIITALLRKSCYRVAAVPDGMKAWEILKARPRNVDLILAEVELPSMSGFSLLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELSHLWQHVWRRQASSNVRTDIQEKVEVTSENETASNHSTDYVAGVERNDNNTEKGSDTQSSSTKVDFEAGSKMQESSQPRQEKASSNDFKLQKDGGHINLSQRLAIHENESGGLAMSCYANDDLPITLSMGLEPTNDGRSPYIASEAEDLLANPSRDATALNHACINYPDDYQRRSPSTVAATNNFGSALHLDLSLRRCQPNDFEDRAAEGRATLKHSSASAFTRYTSRPLQTLPAKSSSICDEQKEFGSNPEHIGSIAATPTSDTINTTLSLQNSNTSMPLMTSLSALSEVAKSSTSETETPHQVTVKDLMSSSQCSGHGSLLSPNLCTQGGGASSSPCSTLVTHPEPILAKQTVYPLNLENHNLEQFLNQHPNTSDPGSRKLENSGKKLEYAENQGHISPTTDHSANSSLCGGNTSHVRSVGYPSTCGSNNNVDRVGIAARVTSESKNEEALSYQGGDPHRSSQREAALTKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRRVYTDDPLPAESNVNTSNGHPNPIEYPFPLFFPAN 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3487535 3496211 - Cp4.1LG05g05750.1 Cpe05g00576 469781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00576 736 SMART REC_2 83 198 IPR001789 GO:0000160
Cpe05g00576 736 ProSiteProfiles Response regulatory domain profile. 84 202 IPR001789 GO:0000160
Cpe05g00576 736 MobiDBLite consensus disorder prediction 218 239 - -
Cpe05g00576 736 CDD psREC_PRR 85 188 - -
Cpe05g00576 736 ProSiteProfiles CCT domain profile. 660 702 IPR010402 GO:0005515
Cpe05g00576 736 Pfam Response regulator receiver domain 85 195 IPR001789 GO:0000160
Cpe05g00576 736 Gene3D - 83 311 - -
Cpe05g00576 736 MobiDBLite consensus disorder prediction 247 278 - -
Cpe05g00576 736 PANTHER TWO-COMPONENT RESPONSE REGULATOR 56 693 IPR045279 GO:0009736
Cpe05g00576 736 SUPERFAMILY CheY-like 82 209 IPR011006 -
Cpe05g00576 736 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 56 693 - -
Cpe05g00576 736 Pfam CCT motif 660 702 IPR010402 GO:0005515
Cpe05g00576 736 MobiDBLite consensus disorder prediction 218 287 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00576 Cpe13g00339 CCT
Cpe05g00576 Cpe13g00339 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01049 Cpe-Chr2:9664362 Cpe05g00576 Cpe-Chr5:3487535 4.13E-16 dispersed
Cpe05g00576 Cpe-Chr5:3487535 Cpe19g00394 Cpe-Chr19:3519895 3.78E-18 dispersed
Cpe13g00339 Cpe-Chr13:3053370 Cpe05g00576 Cpe-Chr5:3487535 0 wgd
Cpe03g01835 Cpe-Chr3:13677288 Cpe05g00576 Cpe-Chr5:3487535 1.18E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49518 PF00072 Response_reg 8.40E-21 CL0304 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00576 K12130 - csv:101209788 1020.76