Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00718 ATGATGTTATCTGCATCGCCATCGACGATAGTTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGATACCTAAAGACTTGCCGCCGGCATTGCCGTCTCGGCCCACTTCCAAGGCTCGGATTCCGCCGCTGCGGCGGGCTTTACCCGTTAATTTCAAGGTTAATGGCGACGGTTCCTCTGAGTGCTGTATTAATGGTTTCAATGGAAGGGAAGATCCATTGAGGAAGGAGAATGGTCTGGCTAACTTTGCATTAAGGAGAGTGAAGAGAGATCAAGGCGATGAATCGCCTTACTTGGTTGCTTCAGAGAAGGATAATGAAGATCAAGTGAATGGTCCGTATGGTTCTTCTCCAGACGGGTCTAACTGGGAGGAGATTATCAGCTATTTTCTCCATAAGAAACTCCGGGTTTGGTGTCAAATTCCATCTGGACAATGGGAGTTAGGAACTATACAATCAAACAGTGGGGCTGAGGCATCTGTCATGCTCTCAAACAATAAGGTTATTAAAGTTTCGACGGTAGATCTTTTACCTACGAATCCCGATATCGTGGAGGGGGTTGATGATCTTGTACAGCTTGGTTATTTGAACGAGCCCTCGGTTGTTAACAGTCTTCAGCAACGATTTTCTCGAGATGAAATTTATGTTAATGAAGTTAATCAATCTATTATCATCAGTGGTGAAAGTGGAGCAGGAAAAACTGAGACAGCAAAAGCTGCACTTCAGTACCTGACTGCTCTTGGCGGTGGCAGTGGCATAGTCGATAGAATCCCACGGGCTAACGTCATCCTCGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGCTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACATGTAAGGAACTTTTTTGTTATGTCTTCTTTGAGCAGTCGAGGGTCGTTCAGCTGGTCAATGGCGAGAGATCGTTCCATGTCTTCTATCAACTTTGTGCTGGAGCGCCATCTACACTTAAAGAGAAATTGAATCTCAGAATGGCCAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTCGTGATCGGTGGTGTGGACGATGCACAGAAATTCCATGTTCTTGTGGAAGCCTTAGATATGCTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTCGTTTGCTTGCTGCAGTTTTATGGATAGGGAACATTACGTTTCAAACGATTAATAGTGAAAATCATGTGGAGGTCGTCATGGCTAATGAAGCGGTCGCAAACGCTGCTGAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCAACTCCAACATGCAATTGGACATTACGACAGGCAACTGATGCGAGAGATGCATTGGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAAGAAGCGAGCACACTGGAAGATCCATAAATATCCTCGACTTCTATGGGTTTGAGTCACTTAAGGCACAAGAACGGCTTCGAACAGTTTTGTATCAATTATGCAAACGAAAGGCTGCAGCAGCATTTTATTCGGCACCTGTTCAAACTTCAGCAGGAGGAAAGTTGCATACCATGGTTGATCGGTTTATCTTGCAGGACTACGAATTTAATGGGGTCGATGGCACCAAACTCAACTTCAAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCTATCGGAGTTCTAGCTTTGTTGGACGAAGAGTTGAGTTTTCCCAAGGCTACCGATCTGACATTTGCTAATAAACTAAAGCAACACTTTAAATCTCATCCTCGCTTCAAAGGCGAGAGAGGTAGGGCTTTCGGTGTTCGCCATTATGCTGGAGAGGTTGTATACGATACAAATGGGTTTTTGGAAAAGAATAGAGATATGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTTCTTGCAAGCTACTGCAATTATTTGCCTCAAAAATGGTTAACCATTCCCACAAACCAACAGTTTCAATGTGTTCTACAGAAGTAGTACAATCCTCCGAGCCAGGCGCGGGTACCAAGTACAAGGTTTTACTATGTGACCTATTTCGTAAATTGGAGCGCACCGGCCATCATTTCATTTGTTGCATAAGACCAAACAGGAATCAAGTTTGTGGCATATTCGAGGAGGACATCGTCTTACAGCAGCTTAGATACTCTGGAATTTTGGAGGTTGTCAGAATTTCAAGATCTGGTTATCCTACCAGAATGATGCATCAAGAATTTGCTGAAAGGTTCGGATTCTTCCTTAAAGAAACTGGTGTATCTCGAGATCCGTTGAGTATATCAATGGCTGTTTTGCAACGATTTAACGTCCACCCCCATATGTACCATGTTGGTTATACCAAGCTATTTTTCCGAGCTGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGCAAGTTGTACAAGGCGTCCTAGCGGTTCAAAAGTACTATCGTGGTTGCCGTTCCCGTGGCCACTTCCTTCAACTTAAGCAAGCAGCAACTACCTTACAATCACTTATTCGTGGCGAAAATGCCAGAAGGAGATGTACCGTTAATGTGCCGAGGTTCTCATTCGTTGTTTATGCTTCCAGTGTTCCTAAGAAAGTTTACGAGCTGCAAGCAGTCATACGAATACAATCGGCTATACGTGGATCGTTGGCTCGAAAGCATTTCAAGAGCATACTGAACTCTTTTCGAGAAAACAGAATGTCTAAAGTAAACGCAGACAAGAGAGCTTCAGAGGACAAACTTCAAGAACAGGTTGAATCCCTAACAACAACTGTGGATGAGCTTCAAAAGAGGGTTGTGATGGCAGAAGCAGCCATGGAGAAAAAGGAAGAGGAAAATGCTGCACTGAGGGAGAAAGTAAAGCAATTTGAGTGTATGCGGTCAGAATATGATGCCAAGATGAAATCCATGGAGGATATGTGGCAAAAGCAGACGGCTTCTTTGCAAATGAGTCTTGCTGTTGCTAAAAGGACTCTTGCTGCTGCTGAAAATGTAGCCTGTCCGCTTGGAAGAGTTGATGTAGCTAATTCACCACCTCACTATTACGATTCTGAGGATATGACGTCGATGGGATCTCGAACTCCCGGTGGTACCACGCCTGTAAAAGCCTTTGGAATCTCTGAGGTTGGAGCAGGGCGAGAAATGAACGGTGCTTTATTTGCAGTGAGCACTCTTGTAAGGGAATTTGAACAGAGAAGAATCGCATTTGATAACGATGCGAAAGCTTTAATTGAATCGAAATCAGGTCATGCACAAATACGGTCTAACATGAATCCAGAAGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAGAAAGAGTACAAGGTAAGATTAAGGGAAATGAAAGGAAAGGTTCATAAATACGGTCATTTTGAGGTCGATAAACTTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGATCATCATCATAG 3519 43.34 MMLSASPSTIVRSSLEEMLDSLRRRDEIEIPKDLPPALPSRPTSKARIPPLRRALPVNFKVNGDGSSECCINGFNGREDPLRKENGLANFALRRVKRDQGDESPYLVASEKDNEDQVNGPYGSSPDGSNWEEIISYFLHKKLRVWCQIPSGQWELGTIQSNSGAEASVMLSNNKVIKVSTVDLLPTNPDIVEGVDDLVQLGYLNEPSVVNSLQQRFSRDEIYVNEVNQSIIISGESGAGKTETAKAALQYLTALGGGSGIVDRIPRANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTCKELFCYVFFEQSRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNLRMASEYSYLNHSECLVIGGVDDAQKFHVLVEALDMLQFTKEDQEHAFRLLAAVLWIGNITFQTINSENHVEVVMANEAVANAAELMGCSPNELKLVLSTPTCNWTLRQATDARDALAKFIYASLFDWLVEQINKSLKPRSEHTGRSINILDFYGFESLKAQERLRTVLYQLCKRKAAAAFYSAPVQTSAGGKLHTMVDRFILQDYEFNGVDGTKLNFKDNQECLNLIEKKPIGVLALLDEELSFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDMLHSDSIQLFSSCSCKLLQLFASKMVNHSHKPTVSMCSTEVVQSSEPGAGTKYKVLLCDLFRKLERTGHHFICCIRPNRNQVCGIFEEDIVLQQLRYSGILEVVRISRSGYPTRMMHQEFAERFGFFLKETGVSRDPLSISMAVLQRFNVHPHMYHVGYTKLFFRAGQIRALEERRKQVVQGVLAVQKYYRGCRSRGHFLQLKQAATTLQSLIRGENARRRCTVNVPRFSFVVYASSVPKKVYELQAVIRIQSAIRGSLARKHFKSILNSFRENRMSKVNADKRASEDKLQEQVESLTTTVDELQKRVVMAEAAMEKKEEENAALREKVKQFECMRSEYDAKMKSMEDMWQKQTASLQMSLAVAKRTLAAAENVACPLGRVDVANSPPHYYDSEDMTSMGSRTPGGTTPVKAFGISEVGAGREMNGALFAVSTLVREFEQRRIAFDNDAKALIESKSGHAQIRSNMNPEEEYRKIKVRFEAWKKEYKVRLREMKGKVHKYGHFEVDKLRRKWWGKLSSRSSS 1172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4471672 4479670 + Cp4.1LG06g07090.1 Cpe06g00718 471498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00718 1172 Gene3D - 512 717 - -
Cpe06g00718 1172 SMART iq_5 851 873 IPR000048 GO:0005515
Cpe06g00718 1172 SMART iq_5 893 915 IPR000048 GO:0005515
Cpe06g00718 1172 SMART iq_5 828 850 IPR000048 GO:0005515
Cpe06g00718 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 873 IPR027417 -
Cpe06g00718 1172 Pfam Myosin head (motor domain) 225 815 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 Gene3D - 832 875 - -
Cpe06g00718 1172 SMART MYSc_2a 186 828 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 PANTHER MYOSIN 226 1169 - -
Cpe06g00718 1172 PANTHER MYOSIN 120 223 - -
Cpe06g00718 1172 Gene3D - 332 388 - -
Cpe06g00718 1172 ProSiteProfiles IQ motif profile. 852 880 IPR000048 GO:0005515
Cpe06g00718 1172 ProSiteProfiles Myosin motor domain profile. 1 827 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 MobiDBLite consensus disorder prediction 101 126 - -
Cpe06g00718 1172 Pfam IQ calmodulin-binding motif 854 872 IPR000048 GO:0005515
Cpe06g00718 1172 Pfam IQ calmodulin-binding motif 896 915 IPR000048 GO:0005515
Cpe06g00718 1172 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 PRINTS Myosin heavy chain signature 269 296 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 PRINTS Myosin heavy chain signature 227 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 PRINTS Myosin heavy chain signature 500 528 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe06g00718 1172 MobiDBLite consensus disorder prediction 27 46 - -
Cpe06g00718 1172 Coils Coil 937 985 - -
Cpe06g00718 1172 PANTHER MYOSIN-2 ISOFORM X1 226 1169 - -
Cpe06g00718 1172 PANTHER MYOSIN-2 ISOFORM X1 120 223 - -
Cpe06g00718 1172 Gene3D Myosin VI head, motor domain, U50 subdomain 389 489 - -
Cpe06g00718 1172 Gene3D - 761 828 - -
Cpe06g00718 1172 Gene3D Kinesin motor domain 143 224 IPR036961 -
Cpe06g00718 1172 Gene3D Kinesin motor domain 225 760 IPR036961 -
Cpe06g00718 1172 ProSiteProfiles IQ motif profile. 894 923 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00725 Cpe06g00718 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00718 Cpe-Chr6:4471672 Cpe17g00648 Cpe-Chr17:5286872 6.27E-126 dispersed
Cpe09g00494 Cpe-Chr9:3270166 Cpe06g00718 Cpe-Chr6:4471672 6.93E-60 dispersed
Cpe02g00725 Cpe-Chr2:4617228 Cpe06g00718 Cpe-Chr6:4471672 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00718 K10357 - csv:101210624 1721.83