Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00215 ATGGGCTGCGTTTTTGGCCGAGAGGTTTCTGCGAAGCCCGTTCAGAGACCGAACGCCGATGACGAAATTAGGGCTTCTGCCAAGGCGGAGGTTCCTGAGATTCGAGCTGATGCTGCCGCTAATGTTCGCAATGGCGGAAGTAGGAACGAGGTTGATGATGATAGAGGTTCGAGGCCGAGGCGGCGATCGTCGAGGCCGAATCCGAGATTGAGTAATCCGCCGAAGCATGGCGAGCAAGTCGCCGCTGGTTGGCCGTCTTGGCTCTCCGCCGTCGCCGGTGAAGCTATCAATGGATGGATTCCTCGCCGTGCTGACAGTTTCGAGAAGCTTGATAAAATTGGGCAAGGGACGTATAGTAATGTGTACAAAGCCAGAGACTCATTGACAGGGAAGATTGTGGCTCTGAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGCGTCAAGTTTATGGCCCGGGAAATTCTCATTCTGCGGCGTTTGGATCATCCAAATGTTGTTAAACTCGAAGGTTTGGTGACGTCCCGAATGTCGTGTAGTTTATATCTTGTATTTGAATACATGGAACACGATCTGGCTGGACTTGCTGCGAGCCCCGGGATCAAGTTTACGGAATCGCAGGTTAAATGTTACATGAACCAATTGTTATCAGGGCTTGAACATTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGATCGAATCTTCTGATCGATAACGATGGGATCCTTAGGATAGCTGATTTCGGATTGGCGTCTGTCTTTGATCCTAACCACAAGCATCCAATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGCGTTGGTGTAGACCTCTGGAGTGCTGGCTGCATTTTAGCCGAGCTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACCGAGGTAAAGCTCGTTAGCAATCCATCTTTCGTTCCGTCTTCAGTTCATCGAATGCCGTTTGATCTTCTTGTTGAGCAGCTGCATAAGATATTCAAGTTATGTGGCTCTCCTACAGAAGAATACTGGAAAAAGTCGAGATTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATAGCAGAGACGTTTAAAGACTTCCCGCCGTCATCTCTGCCACTAATCGAGACGCTTCTCGCCATCGACCCCGCTGAACGCCTAACTGCCACGGCTGCTTTACATAGTGAATTTTTCACTACAAAGCCATATGCTTGTGAGCCTTCCAGTCTTCCTAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTACGGGACGAAGAAGCTAGAAGGCTAAGAGCTGTTGGCAGAAGCAATGCAGATGGAGTGAAGAGAACACGGGCACGTGATCGAGCTGTTCGGGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGACGACGTCTCATAACACACGCAAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGACGGAGCGATTGGCTACCAACTGGGATCTTCGCATCACGTCGATCCGATCTATGATCCTCCCGACGTTCCATTTAGCACCATGAATTTCTCGTATCCAAAAGCAAGCATCCAAACATGGTCTGGTCCCTTGATGGACCCAGGTGCCGTTGGTGCTCCTCCAAGAAGGAGAAAACACACCGCAGGTCATTCATCAAGATCATCATCCAAGGACTTGAATAAGGATAAAAATTCTGCTCGTATCTAA 1764 48.92 MGCVFGREVSAKPVQRPNADDEIRASAKAEVPEIRADAAANVRNGGSRNEVDDDRGSRPRRRSSRPNPRLSNPPKHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTESQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIDNDGILRIADFGLASVFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVKLVSNPSFVPSSVHRMPFDLLVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAVGRSNADGVKRTRARDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGAIGYQLGSSHHVDPIYDPPDVPFSTMNFSYPKASIQTWSGPLMDPGAVGAPPRRRKHTAGHSSRSSSKDLNKDKNSARI 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1430904 1434475 + Cp4.1LG08g04640.1 Cpe08g00215 473181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00215 587 Pfam Protein kinase domain 107 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00215 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Cpe08g00215 587 MobiDBLite consensus disorder prediction 570 587 - -
Cpe08g00215 587 PANTHER OS01G0367700 PROTEIN 54 315 - -
Cpe08g00215 587 Gene3D Transferase(Phosphotransferase) domain 1 190 452 - -
Cpe08g00215 587 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Cpe08g00215 587 PANTHER CELL DIVISION PROTEIN KINASE 331 567 - -
Cpe08g00215 587 PANTHER OS01G0367700 PROTEIN 331 567 - -
Cpe08g00215 587 MobiDBLite consensus disorder prediction 14 31 - -
Cpe08g00215 587 SMART serkin_6 107 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00215 587 MobiDBLite consensus disorder prediction 544 587 - -
Cpe08g00215 587 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Cpe08g00215 587 MobiDBLite consensus disorder prediction 47 61 - -
Cpe08g00215 587 SUPERFAMILY Protein kinase-like (PK-like) 100 418 IPR011009 -
Cpe08g00215 587 CDD STKc_CDK9_like 107 413 - -
Cpe08g00215 587 ProSiteProfiles Protein kinase domain profile. 107 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00215 587 MobiDBLite consensus disorder prediction 1 79 - -
Cpe08g00215 587 MobiDBLite consensus disorder prediction 493 514 - -
Cpe08g00215 587 PANTHER CELL DIVISION PROTEIN KINASE 54 315 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01388 Cpe08g00215 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00932 Cpe-Chr7:8358737 Cpe08g00215 Cpe-Chr8:1430904 0 dispersed
Cpe08g00215 Cpe-Chr8:1430904 Cpe20g00292 Cpe-Chr20:1630422 0 dispersed
Cpe20g00291 Cpe-Chr20:1628395 Cpe08g00215 Cpe-Chr8:1430904 4.08E-73 dispersed
Cpe11g00928 Cpe-Chr11:7792142 Cpe08g00215 Cpe-Chr8:1430904 0 transposed
Cpe03g01388 Cpe-Chr3:11172333 Cpe08g00215 Cpe-Chr8:1430904 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62539 PF00069 Pkinase 2.50E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00215 K08819 - csv:101217952 981.089