Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00383 ATGATTTTTGAGGTCATGGCTAGGAAAGTACATGACACTTTAAGCCAACAATTATACATGGAACGACCAAGAGTTGTTACGGATGTCCGAATTACTGCAGATCATGGTGTGAGTGATGTTTGTGTACAGACGGGTGAGGTATTTTCTCCCCAGTTTGTGCGAGATCGAGCTGCTTTAAGAAGGTTGTCGGATGTGAGTGATGGAGATCAACAACAGCAGCCGCAAAAGAGAACAGGTCTTGCTTTAAATCCGAGCAGCCAACTCGTATATGAGGATCTCAGTGGAATTCTTGGACTCAAGAGGATGAATTCTGAAAGCAGTTCAGAATTATCATCAATGCCCGCGAATGCTTATGCATTTGAAAGGGATAACAAGGTTTATCCTAACAACACAAGCAAATATCAGCGGGAATATAGTGCTACTGGACAAGCATCTGCTGAAAGGGATAACAAGGTTTATCCTAACAACACAAGCAAATATCAGTGGGAATATAGTGCTACTGGACAAGCATCTGGTGCATATGCTGATGAAATTAACCGAGGAGTTCAATTTGACCCCTCAACACTGGCCTTGTATGCAATGGAATCACCTCATTCATGTTATCCTTGTGGGGCTGGATTGGGAGATTTCCCTGTCACTGGCAAGATGAAATTTCTCTGTAGTTTTGGAGGTAGAATATTACCAAGGCCTAATGATGGGAAGCTTAGATATGTAGGTGGAGAAACACGCATTATATCCATTAGGAAAAACATCTCGTGTGAACAACTTATCAGAAAGACATACGCTGTCTGTAAGTATGTCCACACTATAAAGTACCAGCTTCCTGGTGAAGATCTCGATTCACTTATCTCTGTTTGTTCTGATGAGGATCTTCATCATATGATTGAGGAATATCATGAGCTGGAAAACGCAGGGAGTTCTCAAAGACTCAGAATAATTCTTGTTTCTACAAATGATTGTTGTGAGAGTCCTACTTCTATTGAAGGAAGGGTGGTTCAACCAATTGATGTTGATTATCAATATGTTGCGGCTGTAAATGGTATGCTAGACCCAAGTCTTCAAAGGAGCTCTAGTGGACAGAGTTTCACAAGCCAGACTAGCCAGGTGGGAACCATATCAGATCCTAGTCCCAATTTTTGTACTGTTTCTTCACATGCTACAGACTTAAAAGATGCCAATTCACCTATACCAAATTTGGCAGGAATGTTTCCTAGACCTGGTGGTCAATTGTTAATACCCATTCAAATCCCACGCAAGTCATTTAATCAAACACCTTTATTTTCTCCGGTTACAGTAATGCAAAAAGATTTTAAGAACGTGGATCCAACATACGCAGAAGATGCTAGAAACTTCACTCCATTTGTTGCAGAAAAACGTCCATGTGATACGGTTTATTATGGTGATGCAATGGGCCGTCACAATAACCTTTACCATGGTTCTCCGCTGATGAATTATCATCATGAAAAATCTACAGTGGAAACTGATGAGAAATACAAAGTTCATGATGTTCATTTCCCACAAAGCTCCAGCGAAGATTTTGTGCCTGCAACTTACTGGGATCAAAGTGATACACATTCAATCAAAACTCTGCTAAAGGAACGGGCAGTTAATTATGAACAGCTATACTCGGATGCCGAATATTTGATGCAGTTAAGATCTGGAACCACCCACATGAGACAAACAATGATGCATTCACATTCTGAGCCCCTACTAAAGGAACAGGATCAAAAGTTGAAACATGGAGGAGCCTATCCACTGAACTCATTCAATGATAGTGATCAATTATATTCAATGGCAATGTCAAGTTCCTTTCAGGATTTCCAAACGATATGGAAACAGAGAGTTGGCGGGGAATTTCAAGATGCCAAGTATGAGAAACATGGAAAGTTGGCGTCTGGTAGTGAGAATGAAGGATACGAAGAATGCAATTTTGCTGAAAAAAAGGTTAATTTCAATGGAAGTATTTATGTCCCATCACTTAATGGTGATGAAAAATACAAATACTTGCAACATGTTGACTACCAACAAAATGGTTACCCCCCGCTAGAGGTACGAAGCCTTGGAGGTAGAACTTCTGCAGAACGAGGGTTTGAATTAGAAAAATCTGCAGATGTCGTGGATGGCCCCTCCCTCATTTACCGTTTAGAAACAACTGCTCCAAAAGTTTTCGAGGAGAGCCAATATTCTGTCGAGGATCAACGGACCACTTCTGATATAGTAAGGAGCCAACCATTTTCTTGCGCATCTTCTGATCTACTACCTCTTACAACTCAAGCTTTGTGCGACAGAAAGATCATAAATCAGGAACCAACATGGGATAGTTCTGCTTTAGGTAGAGATGTTTCTCTAGGCGATGAGAACTTCGTAACCTGTAATTACCGTAAGGTTGCAGACCATAGTAGAAAAAAGAGCAATCTGGATGATTCTCTGTTTATCAAATCATCAAATTCAGATGATTTTCATAGCAATGAGGACGTGGGATTAGCAGTAATAGTTGAAGATGTAACTCATAGTATACCTCCCGACATACCCTTAGCTTCTGGAGTTATCCCACGGGTTGAAAATGAGGCCAGTGATGACTCTCCATCTTCAAGAGGACATGATGCTCATATTCCTAGTACAGAAACTGACCATGAGGATGCAGACAGTATTCTTAGTTCTAGGGATGAATCAATGAGCGAGGCAGCAATAGCTGAAATTGAAGCCGGCATCTATGGCCTGCAGATCATAAAGAATGAAGATCTTGAAGAACTGCAAGAATTAGGATCTGGGACGTTTGGCACAGTTTTTCATGGAAAATGGAGGGGAACGGATGTTGCTATTAAGAGAATAAAAAAGAGTTGCTTCTCAGGAAGTTTTTCTGAGCAAGAAAGACTGACTAGAGATTTCTGGAGAGAAGCAAGGATTCTATCGACTCTTCACCATCCGAACGTGTTGGCTTTTTATGGAGTGGTTCCTGATGGACCTGATGGAACGTTGGCAACTGTAACGGAGTATATGGTAAACGGGTCATTAAGGCATGTTCTTTTAAGAAAGGATAGAGTGCTTGATCGTCGGAAAAGGCTTATGATTGCAATGGATGCAGCTTTTGGCATGGAATATTTGCATATGAAAAACATTGTTCATTTTGATCTGAAGTGTGATAATTTGTTGGTCAACTTGAGGGATCCTGAACGACCCATATGCAAGGTTGGAGATTTTGGGTTGTCGAGAATTAAGCGCAACACACTTGTTTCTGGAGGTGTGCGTGGAACTCTTCCATGGATGGCACCAGAATTGTTAGATAGTGGCAGTTCTAAGGTCTCTGAGATGGTTGATGTTTTCTCATTCGGTATTGCAATGTGGGAGATTTTGACTGGCGAGGAGCCATATGCCAACATGCATTGTGGTGCCATCATTGGTGGAATTGTAAGTAATACTCTTAGACCACCAATCCCAAAACGCTGCGATACTGAATGGAAAAAGCTAATGGAAGATTGTTGGTCACCTGAACCTGCAGCGAGGCCATCGTTCACCGAGATAACGAATAGACTTCGCAGCATGTCGGTAGCACTCCAGATCAGAAAGAGGCCAACTGTAGGTAGTAGATGA 3591 41.46 MIFEVMARKVHDTLSQQLYMERPRVVTDVRITADHGVSDVCVQTGEVFSPQFVRDRAALRRLSDVSDGDQQQQPQKRTGLALNPSSQLVYEDLSGILGLKRMNSESSSELSSMPANAYAFERDNKVYPNNTSKYQREYSATGQASAERDNKVYPNNTSKYQWEYSATGQASGAYADEINRGVQFDPSTLALYAMESPHSCYPCGAGLGDFPVTGKMKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNISCEQLIRKTYAVCKYVHTIKYQLPGEDLDSLISVCSDEDLHHMIEEYHELENAGSSQRLRIILVSTNDCCESPTSIEGRVVQPIDVDYQYVAAVNGMLDPSLQRSSSGQSFTSQTSQVGTISDPSPNFCTVSSHATDLKDANSPIPNLAGMFPRPGGQLLIPIQIPRKSFNQTPLFSPVTVMQKDFKNVDPTYAEDARNFTPFVAEKRPCDTVYYGDAMGRHNNLYHGSPLMNYHHEKSTVETDEKYKVHDVHFPQSSSEDFVPATYWDQSDTHSIKTLLKERAVNYEQLYSDAEYLMQLRSGTTHMRQTMMHSHSEPLLKEQDQKLKHGGAYPLNSFNDSDQLYSMAMSSSFQDFQTIWKQRVGGEFQDAKYEKHGKLASGSENEGYEECNFAEKKVNFNGSIYVPSLNGDEKYKYLQHVDYQQNGYPPLEVRSLGGRTSAERGFELEKSADVVDGPSLIYRLETTAPKVFEESQYSVEDQRTTSDIVRSQPFSCASSDLLPLTTQALCDRKIINQEPTWDSSALGRDVSLGDENFVTCNYRKVADHSRKKSNLDDSLFIKSSNSDDFHSNEDVGLAVIVEDVTHSIPPDIPLASGVIPRVENEASDDSPSSRGHDAHIPSTETDHEDADSILSSRDESMSEAAIAEIEAGIYGLQIIKNEDLEELQELGSGTFGTVFHGKWRGTDVAIKRIKKSCFSGSFSEQERLTRDFWREARILSTLHHPNVLAFYGVVPDGPDGTLATVTEYMVNGSLRHVLLRKDRVLDRRKRLMIAMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPERPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDSGSSKVSEMVDVFSFGIAMWEILTGEEPYANMHCGAIIGGIVSNTLRPPIPKRCDTEWKKLMEDCWSPEPAARPSFTEITNRLRSMSVALQIRKRPTVGSR 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2396973 2403770 + Cp4.1LG08g02910.1 Cpe08g00383 473349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00383 1196 PANTHER SERINE-THREONINE PROTEIN KINASE 135 574 - -
Cpe08g00383 1196 PANTHER SERINE-THREONINE PROTEIN KINASE 788 1189 - -
Cpe08g00383 1196 Gene3D Transferase(Phosphotransferase) domain 1 1003 1192 - -
Cpe08g00383 1196 CDD PB1_UP2 219 314 - -
Cpe08g00383 1196 PRINTS Tyrosine kinase catalytic domain signature 997 1010 IPR001245 GO:0004672|GO:0006468
Cpe08g00383 1196 PRINTS Tyrosine kinase catalytic domain signature 1105 1127 IPR001245 GO:0004672|GO:0006468
Cpe08g00383 1196 PRINTS Tyrosine kinase catalytic domain signature 1149 1171 IPR001245 GO:0004672|GO:0006468
Cpe08g00383 1196 PRINTS Tyrosine kinase catalytic domain signature 1034 1052 IPR001245 GO:0004672|GO:0006468
Cpe08g00383 1196 SMART serkin_6 915 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00383 1196 ProSitePatterns Protein kinases ATP-binding region signature. 921 946 IPR017441 GO:0005524
Cpe08g00383 1196 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 135 574 - -
Cpe08g00383 1196 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 788 1189 - -
Cpe08g00383 1196 MobiDBLite consensus disorder prediction 858 887 - -
Cpe08g00383 1196 Pfam Protein tyrosine and serine/threonine kinase 917 1178 IPR001245 GO:0004672|GO:0006468
Cpe08g00383 1196 MobiDBLite consensus disorder prediction 843 888 - -
Cpe08g00383 1196 Pfam PB1 domain 231 316 IPR000270 GO:0005515
Cpe08g00383 1196 SUPERFAMILY Protein kinase-like (PK-like) 904 1177 IPR011009 -
Cpe08g00383 1196 ProSiteProfiles Protein kinase domain profile. 915 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00383 1196 CDD STKc_MAP3K-like 921 1178 - -
Cpe08g00383 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Cpe08g00383 1196 SMART PB1_new 230 317 IPR000270 GO:0005515
Cpe08g00383 1196 Gene3D - 234 318 - -
Cpe08g00383 1196 SUPERFAMILY CAD & PB1 domains 231 319 - -
Cpe08g00383 1196 Gene3D Phosphorylase Kinase; domain 1 908 1002 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01573 Cpe08g00383 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00841 Cpe-Chr7:7623623 Cpe08g00383 Cpe-Chr8:2396973 1.87E-24 dispersed
Cpe08g00383 Cpe-Chr8:2396973 Cpe16g00711 Cpe-Chr16:7264664 2.84E-158 dispersed
Cpe20g00270 Cpe-Chr20:1514288 Cpe08g00383 Cpe-Chr8:2396973 1.57E-35 dispersed
Cpe03g01573 Cpe-Chr3:12171462 Cpe08g00383 Cpe-Chr8:2396973 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62545 PF07714 PK_Tyr_Ser-Thr 1.90E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00383 - - cmax:111473634 2261.49