Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00082 ATGGCCGCTGCCGACGAGATTGGACAGCCGCTGCAATTCGACGTCGAACACACTATATTTGTTGCGGTGGGAACGGATGTCCACGACTCCGAAACGACTCTGATTTGGGCTGTGCAGAACTTCGCTGGGAAGAAATTTTGTGTGCTTCACGTTCATCAGCCTGCCCTTCTTGTTGTTCCTCAGAAAAATGAAGAGCCGTCTTCCAATACACCAAAAGAACATGTAGCAAAGGCATTTGATGAACCTGAAAGGCAAAAGCCTTTAGAACTTCTTAATCAATATGTTTTCATTCTTGCCAAACTGGGGGTACAAGCGCGAAAAGTATGGACCGAGACGAACTGCGTTGAGAAAGGGATTGTTGAAATTATTGCTCAGTACAGTATTAAATGGCTAGTCATGGGTTTAGACGCAGAAAGATACAATCTCAAGACGTCCAAGAAAGCTTTCTATGTATGCCAACAAGCACCCATTTGCTGCCACATATGGCTTGTCTGCAGAGGGCGCCTTATATTCTCAAGGGAGGGCGGAATGGGAAGATTCAATCCATCACTGCTGCAAACTTCGGAAATAGGACTGGACCAATCTAACCATCTAAGACTGGACTTTGTAGATGCTCAACAAAAGGAGTATGCATCTGATAGATCTCAAGGTCTGGTGGATCCAAAACATTCCAATAATGAAGCCATTGGTACTTCAAGAACAAGACTATTGTTAAGGAATGAGGTTATTTCATTAGAAAGCTCATGTGTGGAGGAGGTAAAAAAAAGAAAAAAGATGGAAGAAATTTTAGAGACAGGTAAAAAACTAGCAGAACAGATGAACAAAAAGCGTGACAAGCTCTCGAAAGAACTATACGACGTCGAAGAGCAGAAATTATTTCTTGAAAGAAAAGCTTCAGAGTACCGTTGTGAAGTGAAGGAGTTGGAGAAGAAAATGTTTGATGCTGTTGACCTCTTGGTAAGCTTCAGGGAAAAACGAGATAAGTTGCAGATAGAACATGAAGAAGCAAAGAACAAGCTTAGACTGCTGAAGAACATGCTTAAAATGGAACCTACATGTTTTCACAGCGTAGAAATGCCTACATTCTCATTCATGGAGATAATTGAAGCCACCAGAAACTTTGACCCTTCCTGGAAGATTGGTGAGGGAAGACATGGTAGTGTTTATAAAGGCCACCTTCGCCACGTGGACGTTGCTCTAAAAATGTTGCCTTCGTACGGTTCTCATTCACAATCGACGTTCCAATACGAGATTGAAGTTTTGAGTAGGGTAAGGCATCCAAACCTGGTTACAATTATTGGAGCATGTCCAGAATCTAGGTTGATAGTCTATGAGAATTTGAAAAATGGCAGCTTGGAAGAGCACCTATCGTGCAAAGATCGATATCGCCCGCTTCCATGGCAGATACGGATTCGGGTTGCTGCTGATATCTGCTCGGCTCTTATATTTCTCCATTACAATGAGCCTTGCATTGTCCATGGAGATATAAAGCCAAGCAAAATCCTACTTGATGCCAATTTTGTTGCCAAACTGGGTGGCTTGGGCATCTCTCGCTTGATCCCACGAGAATGTCTTGAGATTGGAAGGTTCACTCCAGAATCAGACGTTTACTCTCTTGGTGTTACTTTTCTGCGTATGTTAACTGGCAGAGCAGCTTCGGGAATTGTAAAAGATGTAAAATGTGCTTTAGAAAATGATAAGATTGGTGCCGTTTTGGACTCATCAGCTGGAGATTGGCCTCATGATCTAGCAGAACAATTGGCTCTTGTGGCTTTGAGATGCTGTGTGAAGGAAAAGTCGGATCGGCCTGACCTCGTCTCGGAATTATGGAGTGTTTTGGAGCCTATGAGATCCATTGCCTCGGCATCGTTTTCAGGTTCGAAACAACACTCTCGAGTGCCTGCCCATTTCACGTGTCCTATTTTTCAGGAAATGATGAAAGATCCACTCATTGCTGCAGATGGATTCACATATGAAGCTGATGCAATCAAAGGATGGTTCAAAAGTGGGCATGACACTTCTCCCATGACAAATCTTAAACTTGAACACTGTAATCTTGTGCCAAATTATGCTCTTTTGAATGCAATTCAAGAGTGGCAGCAGCAGCTATGA 2112 42.99 MAAADEIGQPLQFDVEHTIFVAVGTDVHDSETTLIWAVQNFAGKKFCVLHVHQPALLVVPQKNEEPSSNTPKEHVAKAFDEPERQKPLELLNQYVFILAKLGVQARKVWTETNCVEKGIVEIIAQYSIKWLVMGLDAERYNLKTSKKAFYVCQQAPICCHIWLVCRGRLIFSREGGMGRFNPSLLQTSEIGLDQSNHLRLDFVDAQQKEYASDRSQGLVDPKHSNNEAIGTSRTRLLLRNEVISLESSCVEEVKKRKKMEEILETGKKLAEQMNKKRDKLSKELYDVEEQKLFLERKASEYRCEVKELEKKMFDAVDLLVSFREKRDKLQIEHEEAKNKLRLLKNMLKMEPTCFHSVEMPTFSFMEIIEATRNFDPSWKIGEGRHGSVYKGHLRHVDVALKMLPSYGSHSQSTFQYEIEVLSRVRHPNLVTIIGACPESRLIVYENLKNGSLEEHLSCKDRYRPLPWQIRIRVAADICSALIFLHYNEPCIVHGDIKPSKILLDANFVAKLGGLGISRLIPRECLEIGRFTPESDVYSLGVTFLRMLTGRAASGIVKDVKCALENDKIGAVLDSSAGDWPHDLAEQLALVALRCCVKEKSDRPDLVSELWSVLEPMRSIASASFSGSKQHSRVPAHFTCPIFQEMMKDPLIAADGFTYEADAIKGWFKSGHDTSPMTNLKLEHCNLVPNYALLNAIQEWQQQL 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 483132 489324 - Cp4.1LG09g01000.1 Cpe09g00082 474448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00082 703 Gene3D Phosphorylase Kinase; domain 1 354 446 - -
Cpe09g00082 703 Gene3D Transferase(Phosphotransferase) domain 1 447 632 - -
Cpe09g00082 703 Pfam U-box domain 633 702 IPR003613 GO:0004842|GO:0016567
Cpe09g00082 703 ProSitePatterns Protein kinases ATP-binding region signature. 380 401 IPR017441 GO:0005524
Cpe09g00082 703 PANTHER OS02G0152300 PROTEIN 13 212 - -
Cpe09g00082 703 PANTHER OS02G0152300 PROTEIN 242 702 - -
Cpe09g00082 703 SUPERFAMILY RING/U-box 629 702 - -
Cpe09g00082 703 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 633 703 IPR013083 -
Cpe09g00082 703 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 242 702 - -
Cpe09g00082 703 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 13 212 - -
Cpe09g00082 703 ProSiteProfiles Protein kinase domain profile. 374 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00082 703 Pfam Protein tyrosine and serine/threonine kinase 379 605 IPR001245 GO:0004672|GO:0006468
Cpe09g00082 703 Coils Coil 263 311 - -
Cpe09g00082 703 CDD RING-Ubox_WDSUB1_like 637 678 - -
Cpe09g00082 703 ProSiteProfiles U-box domain profile. 632 703 IPR003613 GO:0004842|GO:0016567
Cpe09g00082 703 SMART Ubox_2 636 699 IPR003613 GO:0004842|GO:0016567
Cpe09g00082 703 CDD STK_N 18 167 - -
Cpe09g00082 703 SUPERFAMILY Protein kinase-like (PK-like) 347 605 IPR011009 -
Cpe09g00082 703 Coils Coil 319 346 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00082 Cpe14g00102 CCT
Cpe09g00082 Cpe14g00102 ECH
Cpe09g00082 Cpe13g00095 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00082 Cpe-Chr9:483132 Cpe12g00371 Cpe-Chr12:2638981 3.42E-164 dispersed
Cpe14g00102 Cpe-Chr14:555543 Cpe09g00082 Cpe-Chr9:483132 8.93E-76 wgd
Cpe03g01733 Cpe-Chr3:13138432 Cpe09g00082 Cpe-Chr9:483132 3.28E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62583 PF07714 PK_Tyr_Ser-Thr 4.20E-26 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00082 - - cmax:111467600 1353.19