Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00137 ATGGAGGAGGAGAAAGAAGCCGGAGTTTCTAGGTTTACAGTTACCAACAATGAAGCCCTAGACACCTTCCAGTTAGCTCCCAGAACAGAAACCCTAAAACCCACCAATGAGCCTAAAGTAACGGCTACGACCACACCGGCGAGCATCCCAACCACTGCACCACCACCGGGATTCACGGCGGTTTCCACTACAGATACAAAGAAGAAGAGAGGTCGGCCGAGAAAGTACGAGGCGGATGGGAAGCGGTCACTGACATTAGCGTTGTCTCCGATGCCGATATCGTCGTCAATTCCACTGACCGGCGAGTTCCCCAACTGGAAACGAGACAACGACATGTCTCTAGCGATAATCAAGAAGCCACAGAGATTTGAGTTTGAGAATCCGGGTCAGAAACTTGCATACTCTGTTGGTGCTAATTTTACTCCCCATGTTATCACTGTCAATGCTGGAGAGGACATTACTATGAAGATCATGTCTCTCTCTCAGCAAGAATCCCGAGCTATTTGCATTCTTTCTGCAAATGGCACAATTTCAAATGTCACACTTCGACAGGCCACTTCTTCCGGAGGTCAGAAACTTGCATACTCTGTTGGTGCTAATTTTACTCCCCATGTTATCACTGTCAATGCTGGAGAGGACATTACTATGAAGATCATGTCTCTCTCTCAGCAAGAATCCCGAGCTATTTGCATTCTTTCTGCAAATGGCACAATTTCAAATGTCACACTTCGACAGGCCACTTCTTCCGGAGGTACCTTAACGTACGAGGGTTGTTTTGAAATACTCGCATTGACTGGATCGTTTATGCCGACACAGAATGGAGCTACAAAGAGTAGATGTGGTGGAATGAGCGTTTCCCTAGCGGGTCAAGATGGACAAGTGGTCGGCGGTGGACTTGCTGGGTTGTTGGTAGCTGCTGGTCCTGTTCAAGTTGTGGTAGGTAGTTTCCTTCCGGGTCACCAGCAAGAACAGAAGCCAAAGAAGCCTAGAAATGAGGCCACAACCATTTTCTTTCCTCCCATCAATACCATCAGTGGTGAAGAAATGAAGGCGGCATACACCGGTGGTATCAAGCCGCCTATTGTCACCACACCGTCCAATCAAGAACATAAGCCACCATCGCCAAGCGCAGTGACACCCTTCAAAATCTCCTCCACTGACAACTTACCTCAATCAGAACAAGAACCCAAAACTCAAAGTCAATCAAACTGTGAGGTTTCTTGTTGA 1227 47.6 MEEEKEAGVSRFTVTNNEALDTFQLAPRTETLKPTNEPKVTATTTPASIPTTAPPPGFTAVSTTDTKKKRGRPRKYEADGKRSLTLALSPMPISSSIPLTGEFPNWKRDNDMSLAIIKKPQRFEFENPGQKLAYSVGANFTPHVITVNAGEDITMKIMSLSQQESRAICILSANGTISNVTLRQATSSGGQKLAYSVGANFTPHVITVNAGEDITMKIMSLSQQESRAICILSANGTISNVTLRQATSSGGTLTYEGCFEILALTGSFMPTQNGATKSRCGGMSVSLAGQDGQVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEQKPKKPRNEATTIFFPPINTISGEEMKAAYTGGIKPPIVTTPSNQEHKPPSPSAVTPFKISSTDNLPQSEQEPKTQSQSNCEVSC 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 808107 813671 + Cp4.1LG09g01350.1 Cpe09g00137 474503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00137 408 MobiDBLite consensus disorder prediction 356 408 - -
Cpe09g00137 408 ProSiteProfiles PPC domain profile profile. 198 342 IPR005175 -
Cpe09g00137 408 Gene3D - 203 333 - -
Cpe09g00137 408 Gene3D - 142 198 - -
Cpe09g00137 408 MobiDBLite consensus disorder prediction 24 48 - -
Cpe09g00137 408 CDD DUF296 202 316 IPR005175 -
Cpe09g00137 408 SUPERFAMILY AF0104/ALDC/Ptd012-like 200 323 - -
Cpe09g00137 408 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 190 - -
Cpe09g00137 408 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 191 388 - -
Cpe09g00137 408 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 184 IPR005175 -
Cpe09g00137 408 Pfam Plants and Prokaryotes Conserved (PCC) domain 203 316 IPR005175 -
Cpe09g00137 408 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 189 - -
Cpe09g00137 408 ProSiteProfiles PPC domain profile profile. 137 190 IPR005175 -
Cpe09g00137 408 MobiDBLite consensus disorder prediction 360 408 - -
Cpe09g00137 408 MobiDBLite consensus disorder prediction 24 76 - -
Cpe09g00137 408 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 190 IPR039605 GO:0003680
Cpe09g00137 408 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 191 388 IPR039605 GO:0003680
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00713 Cpe09g00137 CCT
Cpe05g00713 Cpe09g00137 ECH
Cpe09g00137 Cpe13g00070 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01680 Cpe-Chr3:12807604 Cpe09g00137 Cpe-Chr9:808107 8.69E-50 dispersed
Cpe08g00488 Cpe-Chr8:3132250 Cpe09g00137 Cpe-Chr9:808107 1.07E-68 dispersed
Cpe08g00773 Cpe-Chr8:6170305 Cpe09g00137 Cpe-Chr9:808107 5.08E-27 dispersed
Cpe09g00137 Cpe-Chr9:808107 Cpe13g00070 Cpe-Chr13:546126 1.77E-59 dispersed
Cpe13g00201 Cpe-Chr13:1547397 Cpe09g00137 Cpe-Chr9:808107 3.55E-24 wgd
Cpe05g00713 Cpe-Chr5:4376541 Cpe09g00137 Cpe-Chr9:808107 1.69E-29 wgd
Cpe05g00281 Cpe-Chr5:1584860 Cpe09g00137 Cpe-Chr9:808107 8.66E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00137 - - csv:101217222 351.673