Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01010 ATGAGTATCAAAATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGGTGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTTCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTTGCCTATGAAGCCGAGGCTAGAATAAAAGATCCTGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTTGAGGAATTTGGAAGGAATTTGGAGGAATTAGGCTCCATGTGA 381 41.21 MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFGRNLKEFGGIWKEFEGIWRNFEEFGRNLEELGSM 126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8933543 8934946 + Cp4.1LG09g10070.1 Cpe09g01010 475376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01010 126 PANTHER PROTEIN LATERAL ORGAN BOUNDARIES 13 93 - -
Cpe09g01010 126 Pfam Lateral organ boundaries (LOB) domain 19 93 IPR004883 -
Cpe09g01010 126 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 93 - -
Cpe09g01010 126 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01574 Cpe09g01010 CCT
Cpe09g01010 Cpe20g00259 CCT
Cpe09g01010 Cpe20g00259 ECH
Cpe04g01574 Cpe09g01010 ECH
Cpe09g01010 Cpe18g00859 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01010 Cpe-Chr9:8933543 Cpe11g00664 Cpe-Chr11:4450407 5.45E-40 dispersed
Cpe01g02332 Cpe-Chr1:19603996 Cpe09g01010 Cpe-Chr9:8933543 9.02E-42 wgd
Cpe18g00859 Cpe-Chr18:7908787 Cpe09g01010 Cpe-Chr9:8933543 1.01E-45 wgd
Cpe20g00259 Cpe-Chr20:1458285 Cpe09g01010 Cpe-Chr9:8933543 1.54E-52 wgd
Cpe04g00534 Cpe-Chr4:5794118 Cpe09g01010 Cpe-Chr9:8933543 2.09E-43 wgd
Cpe04g01574 Cpe-Chr4:12321467 Cpe09g01010 Cpe-Chr9:8933543 4.85E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50038 PF03195 LOB 1.70E-31 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01010 - - zju:107418298 152.91