Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00650 ATGGAGCCTCCTCTGTTATTCTTGGTGCTGCTGCTCCTCTGGGGTGCTCTGTTTTCCTCCTCTGCCGACACTAGACCCCGAAGTTTGCCGGAGATTCAGGCATTGATGTCCTTTAAACTTAATTTACATGACCCTCTTGGTGCATTGACTGCTTGGGATTCTTCCACCCCATTGGCGCCCTGTGACTGGCGGGGTATTGTTTGTACCAATAATCGAGTCACTGAACTCCGTTTGCCTCGTCTTCAACTCTCTGGTCGATTGACCGATCAGTTGCCCAATTTGCCCATGTTGAGGAAGCTGAGTATCCGTTCCAATTTCTTCAATGGTACCATTCCGTCTTCTTTGTCCAAATGTCTGTTTCTGCGTTCCGTTTTCTTGCAGTATAATTCGTTTTCCGGTGGCATTCCGGCGGAGTTTGGGAATATGAGTAATCTCCGTATTCTCAACGTGGCGGAGAATCACCTCTCTGGTGTCATCCCCGGCGACCTTCCGAGTAGCCTTAGGTATCTCGATCTTTCGTCGAACGCATTTTCCGGTCAGATTCCAAGGAGCATTGTGAACATGACACAGCTTCAGGTTGTTAATCTCTCTTTCAACATGTTCGGCGGGGAGATTCCGGCGAGCTTTGGTGAGCTTCAAGAGCTTAAACATCTCTGGCTCGACCACAATGTTTTAGAAGGGACGTTGCCTTCGGCTCTTGCGAATTGTTTTTCGCTCGTTCATTTGAGCGTTGAAGGAAATGCACTCCAAGGCGTAATCCCCGCCGCTATTGGAGCTCTTCCGAATCTTCAAGTTATTTCACTCTCGCATAATAGTCTCTCTGGTTCAGTTCCTTACTCCATGTTTTGCAATGTCTCGACGCATCCGCCGTCGCTTCGGATCGTTCAACTTGGATTTAATGGGTTCACGGACATTGTCAAATCTCAGACAGCAACGTGTTTTAGTGCTCTACAGGTCCTCGATATCCAACACAATCAGATAACGGGAGAGTTCCCTTCGTGGTTAACGGGCGTTTCCACTCTGACACTCTTGGATTTTTCCGTCAATCACTTCTCCGGCCAGATTCCGCCTGGGATTGGGAATCTTTCGGGACTGCAAGAGCTCAGATTAGCGAATAATTCATTTCACGGCCTAATGGCGCTTGGGAATTTAACAGCAATGGAGCTCGGTGGGAACGAATTTTCCGGTAATGTTCCGACTGGCATTGGGAATCTCAGTCGTCTTGAGATTTTGAATCTCAGCGCCAACAGTCTTTCCGGGATGATTCCTTGCCATTTGAGCTCTCTGGTAATTGCATTACAAGAAAACAAGCTATCTGGGAATGTTCCTGAAGGATTCAGTAGTTTAATGGGTTTGCGCTACTTGAATCTAAGCTCAAACAGATTTTCCGGTCAAATCCCTTCAAATTATGGGTTTCTTCGATCACTTGTTTCTCTGTCATTATCAGACAATCACATTTCCGGCTCGATCCCTTCCGAGCTAGGTAACTGCTCTGATCTACAAATTTTGGAGGTCCATTCAAATGCACTTTCAGGTCGTATTCCGGCCGATCTGTCTCGTTTATCTCATCTGCTAGAGCTGGACTTGGGTAGGAATAAATTGACTGGTGAAATCCCAGAGGCGATCTCGAGTTGCTCGTCTTTAAAATCTCTCCGTCTGAACTCAAATCATCTTTCGGGTAGCATACCGGAGTCGTTGTCGAAGCTCTCGAACTTAACCTCGCTCGACCTCTCATCCAACAATTTAAGTGGTGTAATCCCTGCTAATCTTAGCTCCATTACCGGATTGGCGAGCTTAAACGTATCGAGTAATGGTCTAGAAGGCGAAATTCCACCCTCTTTAGGCTCTAGATTCAACAGTTCATCTGTGTTTGCTAACAATTCTGATTTATGTGGGAAACCATTGGCTCGGTATTGTAAGGATACAGAGAAAAAGGACAGAATGAAGAGATTGATACTCTTCATTGCAGTGGCCGCCAGTGGAGCTTGCCTCTTGACTTTGTGTTGCTGCTTTTACATTTTCAGCTTGTTGAGATGGCGGAAGAGGCTCAAAGAGAAGGCGTCTGGAGAGAAGAAAACAAGCCCAGCAAGGGTTAGCTCTGCGGCAAGTGGTGGCCGTGGAAGCTCAGAAAATGGAGGGCCAAAGCTTGTAATGTTCAACAACAAGATTACCTTGGCGGAAACAATCGAGGCAACAAGGCAATTCGACGAAGAAAATGTTCTAAGCAGAACCCGTTATGGGTTGGTTTTCAAAGCTTGCTACAATGATGGCATGGTGCTCTCAATCCGCCGCCTCTCAAATGGATCATTGGACGAAAACATGTTCAGAAAAGAAGCTGAATCATTGGGAAAAGTTAGGCACCGCAATCTCACTGTTCTTCGTGGCTACTATGCTGGCCCACCTGATATGCGGCTGTTAGTATATGACTACATGCCTAATGGAAACCTTGCCACTCTCCTTCAGGAAGCATCTCACCAAGATGGTCATGTTCTAAATTGGCCAATGCGGCATCTCATTGCTCTTGGAATCGCCCGTGGCTTAGCCTTTCTTCATTCATCATCCATTATCCATGGAGATGTTAAGCCACAAAGTGTTCTATTCGACGCCGATTTCGAAGCTCATTTGTCCGATTTCGGGCTCGATCGATTAACTCTCATGGCCTCTACCGAAGCATCCACATCTACCTTAGAGTTCTTACTAGGTGTAAAAGTTGGATTGCTTTGCACTGCACCCGATCCCCGTGATCGGCCAACCATGTCGGATATCGTTTTCATGCTCGAAGGTTGTCGAGTCGGACCCGATATCCCATCCTCGGCCGATCCCACCTCCCAACTCTCACCACCGAACCCA 2850 47.09 MEPPLLFLVLLLLWGALFSSSADTRPRSLPEIQALMSFKLNLHDPLGALTAWDSSTPLAPCDWRGIVCTNNRVTELRLPRLQLSGRLTDQLPNLPMLRKLSIRSNFFNGTIPSSLSKCLFLRSVFLQYNSFSGGIPAEFGNMSNLRILNVAENHLSGVIPGDLPSSLRYLDLSSNAFSGQIPRSIVNMTQLQVVNLSFNMFGGEIPASFGELQELKHLWLDHNVLEGTLPSALANCFSLVHLSVEGNALQGVIPAAIGALPNLQVISLSHNSLSGSVPYSMFCNVSTHPPSLRIVQLGFNGFTDIVKSQTATCFSALQVLDIQHNQITGEFPSWLTGVSTLTLLDFSVNHFSGQIPPGIGNLSGLQELRLANNSFHGLMALGNLTAMELGGNEFSGNVPTGIGNLSRLEILNLSANSLSGMIPCHLSSLVIALQENKLSGNVPEGFSSLMGLRYLNLSSNRFSGQIPSNYGFLRSLVSLSLSDNHISGSIPSELGNCSDLQILEVHSNALSGRIPADLSRLSHLLELDLGRNKLTGEIPEAISSCSSLKSLRLNSNHLSGSIPESLSKLSNLTSLDLSSNNLSGVIPANLSSITGLASLNVSSNGLEGEIPPSLGSRFNSSSVFANNSDLCGKPLARYCKDTEKKDRMKRLILFIAVAASGACLLTLCCCFYIFSLLRWRKRLKEKASGEKKTSPARVSSAASGGRGSSENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTLMASTEASTSTLEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQLSPPNP 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3742794 3746200 + Cp4.1LG10g00460.1 Cpe10g00650 476187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00650 950 Pfam Protein kinase domain 745 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00650 950 SUPERFAMILY RNI-like 378 616 - -
Cpe10g00650 950 Gene3D Transferase(Phosphotransferase) domain 1 811 901 - -
Cpe10g00650 950 PANTHER - 6 379 - -
Cpe10g00650 950 Gene3D Ribonuclease Inhibitor 431 648 IPR032675 -
Cpe10g00650 950 SUPERFAMILY Protein kinase-like (PK-like) 714 936 IPR011009 -
Cpe10g00650 950 Pfam Leucine Rich repeat 522 541 IPR001611 GO:0005515
Cpe10g00650 950 SUPERFAMILY RNI-like 69 376 - -
Cpe10g00650 950 MobiDBLite consensus disorder prediction 688 715 - -
Cpe10g00650 950 Gene3D Ribonuclease Inhibitor 165 377 IPR032675 -
Cpe10g00650 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 296 429 - -
Cpe10g00650 950 SMART LRR_typ_2 473 497 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 142 165 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 521 545 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 94 118 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 260 284 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 569 593 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 212 235 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 405 428 IPR003591 -
Cpe10g00650 950 SMART LRR_typ_2 362 384 IPR003591 -
Cpe10g00650 950 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515
Cpe10g00650 950 Gene3D Ribonuclease Inhibitor 30 164 IPR032675 -
Cpe10g00650 950 Gene3D Phosphorylase Kinase; domain 1 708 810 - -
Cpe10g00650 950 PRINTS Leucine-rich repeat signature 569 582 - -
Cpe10g00650 950 PRINTS Leucine-rich repeat signature 408 421 - -
Cpe10g00650 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 381 895 - -
Cpe10g00650 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 896 944 - -
Cpe10g00650 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 379 - -
Cpe10g00650 950 PANTHER - 381 895 - -
Cpe10g00650 950 PANTHER - 896 944 - -
Cpe10g00650 950 PANTHER - 296 429 - -
Cpe10g00650 950 Gene3D Ribonuclease Inhibitor 378 430 IPR032675 -
Cpe10g00650 950 MobiDBLite consensus disorder prediction 693 707 - -
Cpe10g00650 950 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Cpe10g00650 950 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Cpe10g00650 950 ProSiteProfiles Protein kinase domain profile. 735 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00650 Cpe19g00846 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00650 Cpe-Chr10:3742794 Cpe05g00090 Cpe-Chr5:430776 3.57E-119 dispersed
Cpe10g00650 Cpe-Chr10:3742794 Cpe14g00551 Cpe-Chr14:3496809 1.11E-07 wgd
Cpe10g00650 Cpe-Chr10:3742794 Cpe19g00846 Cpe-Chr19:6260586 1.11E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62657 PF00069 Pkinase 7.50E-18 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00650 - - cmax:111478744 999.579