Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe13g00070 | ATGGAGGAGAAAGAGGGAGTGGATTTTGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTCGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCGATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTAATATGTTCTTGGTTTTTCTTGAAATTTATGCTGATTTTCGTCATGGTAACAAGGTTGCCTTCATTGCTGGAGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGGTCGATTTGAGATACTTTCGTTGTCTGGATCATATATGCCTTCTGAGAGCGGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTACAGGTGGTGGTGGGCAGTTTCCTACCACCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAACGCAATTTTACCACCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAACTGAAGATAAACCAGCCTCTTTAGACCAAAATCCAGCTTTTAAAACTCCACAAGTCAACGAAAAGTTACCATTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA | 924 | 48.27 | MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTSTDSESPPPQPLASVPTVAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPGNMFLVFLEIYADFRHGNKVAFIAGADFTPHVITVNIGEGRFEILSLSGSYMPSESGGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLTEDKPASLDQNPAFKTPQVNEKLPFPQESRGVLNHSNHEVSC | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 546126 | 553123 | - | Cp4.1LG13g00830.1 | Cpe13g00070 | 479268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe13g00070 | 307 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 150 | 229 | - | - | |
Cpe13g00070 | 307 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Cpe13g00070 | 307 | MobiDBLite | consensus disorder prediction | 268 | 307 | - | - | |
Cpe13g00070 | 307 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 155 | 292 | IPR039605 | GO:0003680 | |
Cpe13g00070 | 307 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 155 | IPR039605 | GO:0003680 | |
Cpe13g00070 | 307 | MobiDBLite | consensus disorder prediction | 268 | 282 | - | - | |
Cpe13g00070 | 307 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 | 155 | 292 | - | - | |
Cpe13g00070 | 307 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 | 8 | 155 | - | - | |
Cpe13g00070 | 307 | Gene3D | - | 132 | 234 | - | - | |
Cpe13g00070 | 307 | MobiDBLite | consensus disorder prediction | 221 | 244 | - | - | |
Cpe13g00070 | 307 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 152 | 215 | IPR005175 | - | |
Cpe13g00070 | 307 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Cpe13g00070 | 307 | ProSiteProfiles | PPC domain profile profile. | 83 | 236 | IPR005175 | - | |
Cpe13g00070 | 307 | CDD | DUF296 | 135 | 215 | IPR005175 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g00713 | Cpe13g00070 | CCT | |
Cpe05g00713 | Cpe13g00070 | ECH | |
Cpe09g00137 | Cpe13g00070 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00855 | Cpe-Chr8:6762323 | Cpe13g00070 | Cpe-Chr13:546126 | 1.26E-28 | dispersed | |
Cpe09g00137 | Cpe-Chr9:808107 | Cpe13g00070 | Cpe-Chr13:546126 | 1.77E-59 | dispersed | |
Cpe13g00070 | Cpe-Chr13:546126 | Cpe15g00219 | Cpe-Chr15:1895199 | 2.12E-21 | dispersed | |
Cpe13g00070 | Cpe-Chr13:546126 | Cpe05g00713 | Cpe-Chr5:4376541 | 3.17E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe13g00070 | - | - | csv:101211908 | 418.313 |