Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00201 ATGGAGGGAAGGGACGGTGGTGCAAGTAGTGGGGTTACTGTAGTTGGATCAGATGCTCCGTCCAAGTACCAAATAGCTCCCAGGACCTCCGGTAGCCCACCGCAGAGCGGTGGATCAACGCTGCCACCGGCGACTCAACCAACTTCCACGCCGTCGGCCTCGGCGCAGGTACCTGCGCAGCCTACGCCACCCACGGCGGCCTCCTCTGTTCCGGGAAAGAAGAAAAGAGGGAGGCCGAGAAAATATGGACCCGATGGCTCTGTTAATATGGCTCTGTCTCCCAAGCCGATATCTTCGTCGGTGCCGCCGCCGGTGATTGACTTCTCGGCGGAGAAGAAGGGGAAAGTCCGGCCGGCGAGTGGTGTGAGCAAAACCAAATTCGAAGTGGATAATTTAGGCGATTGGGTGGTTCCATGTTCTGTTGGTGCAAATTTTACGCCTCATATCATCACTGTCGATGCGGGCGAGGTTGTAGTAGGGAGTTTTCTTTCTGGAAATCAACATGAGCAGAAACCTAAAAAGCCAAAACAAGATACTAATTCAACTGCTCCGCCAACTGCTGCCATTCCAATATCTTGCGTCGACCCTAAGTCGAACCTCTCGCCGTCCAGTCCCTTTCGTGGCGATAACTGGTCGACGCTGCCAACCGATTCGAGGAATAATAAGCCAACTGATATCAATGTATCCCTACCCAGTGCTTGA 702 53.7 MEGRDGGASSGVTVVGSDAPSKYQIAPRTSGSPPQSGGSTLPPATQPTSTPSASAQVPAQPTPPTAASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKKGKVRPASGVSKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEVVVGSFLSGNQHEQKPKKPKQDTNSTAPPTAAIPISCVDPKSNLSPSSPFRGDNWSTLPTDSRNNKPTDINVSLPSA 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1547397 1550251 + Cp4.1LG13g01930.1 Cpe13g00201 479399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00201 233 MobiDBLite consensus disorder prediction 165 233 - -
Cpe13g00201 233 MobiDBLite consensus disorder prediction 196 233 - -
Cpe13g00201 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 156 231 - -
Cpe13g00201 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 158 - -
Cpe13g00201 233 MobiDBLite consensus disorder prediction 1 121 - -
Cpe13g00201 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 156 231 IPR039605 GO:0003680
Cpe13g00201 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 158 IPR039605 GO:0003680
Cpe13g00201 233 MobiDBLite consensus disorder prediction 23 67 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe13g00201 Cpe14g00855 CCT
Cpe13g00201 Cpe14g00855 ECH
Cpe08g00488 Cpe13g00201 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00201 Cpe-Chr13:1547397 Cpe05g00713 Cpe-Chr5:4376541 4.88E-16 dispersed
Cpe13g00201 Cpe-Chr13:1547397 Cpe14g00855 Cpe-Chr14:7073358 4.33E-55 wgd
Cpe13g00201 Cpe-Chr13:1547397 Cpe03g01680 Cpe-Chr3:12807604 6.14E-17 wgd
Cpe13g00201 Cpe-Chr13:1547397 Cpe05g00281 Cpe-Chr5:1584860 8.77E-126 wgd
Cpe13g00201 Cpe-Chr13:1547397 Cpe08g00773 Cpe-Chr8:6170305 2.62E-49 wgd
Cpe13g00201 Cpe-Chr13:1547397 Cpe08g00488 Cpe-Chr8:3132250 1.78E-25 wgd
Cpe13g00201 Cpe-Chr13:1547397 Cpe09g00137 Cpe-Chr9:808107 3.55E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00201 - - csv:101210208 215.312