Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00356 ATGGAGGGAGCGGAAATGGAGCTTGAGCGACGCAGCAAGTTTCTGAATGGGCTTATTTTGAAGAAGAAGGCGGGGGAGCATCAAGAGCACCGCGATCGTCTCAATGTTCGCGTTAGAGCCTCCGATATGCCGTTTCCTCTCCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTTCTTGATTCCATGCCTGGGAAGCTCGATAGCAAACGCCTCGCTCTTGCGCTCAAAAAGGAATTTGATTCGTCCTATGGTCCAGCATGGCATTGCATCGTGGGAACTAGCTTTGGGTCGTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATCGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTGTCTCGTGGAAAATCTTTGAAAGATTGA 405 48.15 MEGAEMELERRSKFLNGLILKKKAGEHQEHRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGKSLKD 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3616021 3618188 - Cp4.1LG13g03550.1 Cpe13g00356 479554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00356 134 Pfam Dynein light chain type 1 36 121 IPR001372 GO:0007017|GO:0030286
Cpe13g00356 134 PANTHER DYNEIN LIGHT CHAIN 1 127 - -
Cpe13g00356 134 PANTHER DYNEIN LIGHT CHAIN 1 127 IPR001372 GO:0007017|GO:0030286
Cpe13g00356 134 SMART Dynein_light_2 31 121 IPR001372 GO:0007017|GO:0030286
Cpe13g00356 134 SUPERFAMILY DLC 29 121 IPR037177 GO:0007017|GO:0030286
Cpe13g00356 134 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 24 122 IPR037177 GO:0007017|GO:0030286
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe13g00356 Cpe14g00050 CCT
Cpe01g01836 Cpe13g00356 CCT
Cpe13g00356 Cpe14g00050 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00356 Cpe-Chr13:3616021 Cpe20g00211 Cpe-Chr20:1215832 6.17E-35 dispersed
Cpe01g01836 Cpe-Chr1:15612450 Cpe13g00356 Cpe-Chr13:3616021 4.90E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00356 K10418 - csv:101219841 258.455