Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe13g00675 ATGGCGGATATGGATTTCGTCGAGGGTGTTGGAGAGAGTTCTTCGCCGCCTCGAAGCTTCGGTGGCTTCTGTGCTGTCCACGATGTTCGGAACGATGTTTATACTCGGTTAATTGAGCGTGGACATGAGGAGGCAGTTTCTAATCCCCAATTTCGCGAGAACTTGGATGCGCACTTCAATCGCTTGCCTCCGAGTTATGGACTTGATATTAACATGGAGAAGGTGGAAGATGTTTTGTTACATCAAAAGCTTCTTTCCCTGGCGAAGGATCCTGAGAAGTGCCCTGTTTACCACATTCGTTTTCTGGAGCACTTAAGTACTAAGTCAGATGGCAATGATGATCACGTTTTTATTGATAGTATTCTATTAAGTGGCTCATCTAATGAAGCAGCTGATAGAAGACTTCCACTGTCGCACGAGAGAACTCAAGGAAATATAATTGACTTTGAGCCTTGTTCCAAGCTTGAGGACTTAAATTTGGATGTTGGAAAGAACTCAAAGGCCATGGGTGAGAGATATTATAAGGACAATTTTTCCAAAAGGCAGGGCAGTATTGCACATGTTCCAATACATGAAGTGATATTTTCAACGATTGACAAGCCAAAGCTTCTTAGCCAGCTTTCTGCTTTGCTTTCTGATATAGGACTTAACATCCGAGAAGCACATGTGTTTTCGACATCTGATGATTACTCCTTGGATGTATTTGTCGTGGATGGATGGCCTGTTGAGGAAACTGGTGGTTTGTATGAAGCTATGGAAAAAGCAGTGGCTAGATATGAGGGGTCATGGTCTGGTTCTTCACATTCTCATCCAGCAGTCAAGAAAACATTAGCCGCCCAGAAAAAACCAGAAGATTGGGAAATAAATAGACGATCTGAAGATCTAAATGATGATTTAGAGGATGAATTCAATCAAGAAGTGGCAATTCTCAGGAAGGTCCAGCACAAAAATGTAGTTCGTTTTATAGGTGCGTGTACAAACTCTCCACATTTGTGTATTGTAACAGAGTATATGCCAGGAGGGAGTCTTTATGATTACTTGCACAAGAATCATTGCGTGTTGAAGCTCTCACAACTGCTGAAGTTTGCTATTGATGTTTGTGAAGGAATGGAGTACTTACATTTAAATGACATTATTCATAGAGACTTGAAGACAGCAAACCTGCTAATGAACACTCAACATGTTGTGAAGGTGGCAGATTTTGGAGTTGCGCGATACCAGAGTCAAGGAGTAATGACAGCAGAAACTGGAACATACAGATGGATGGCACCTGAGGTAATAAATCATCTGCCATATGATCAGAAAGCAGATATTTTCAGTTTTGCGATTGTGCTTTGGGAACTAGTAACAGCAAAGGGACTGCGTCCAGATCTTCCCAAAAATGCTCACCCCAAATTGTTGGATTTGATGCGACGATGTTGGGATGCAGAACCTGAAAATCGGCCTCCATTTACTGAGATAAAAGTTGAACTTGAAAATCTGCTCGAAGAAGTTCAGATGTGTACAAAATAG 1512 41.73 MADMDFVEGVGESSSPPRSFGGFCAVHDVRNDVYTRLIERGHEEAVSNPQFRENLDAHFNRLPPSYGLDINMEKVEDVLLHQKLLSLAKDPEKCPVYHIRFLEHLSTKSDGNDDHVFIDSILLSGSSNEAADRRLPLSHERTQGNIIDFEPCSKLEDLNLDVGKNSKAMGERYYKDNFSKRQGSIAHVPIHEVIFSTIDKPKLLSQLSALLSDIGLNIREAHVFSTSDDYSLDVFVVDGWPVEETGGLYEAMEKAVARYEGSWSGSSHSHPAVKKTLAAQKKPEDWEINRRSEDLNDDLEDEFNQEVAILRKVQHKNVVRFIGACTNSPHLCIVTEYMPGGSLYDYLHKNHCVLKLSQLLKFAIDVCEGMEYLHLNDIIHRDLKTANLLMNTQHVVKVADFGVARYQSQGVMTAETGTYRWMAPEVINHLPYDQKADIFSFAIVLWELVTAKGLRPDLPKNAHPKLLDLMRRCWDAEPENRPPFTEIKVELENLLEEVQMCTK 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6349189 6359100 - Cp4.1LG13g04120.1 Cpe13g00675 479873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe13g00675 503 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 291 501 - -
Cpe13g00675 503 SMART serkin_6 240 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00675 503 PRINTS Tyrosine kinase catalytic domain signature 436 458 IPR001245 GO:0004672|GO:0006468
Cpe13g00675 503 PRINTS Tyrosine kinase catalytic domain signature 335 348 IPR001245 GO:0004672|GO:0006468
Cpe13g00675 503 PRINTS Tyrosine kinase catalytic domain signature 417 427 IPR001245 GO:0004672|GO:0006468
Cpe13g00675 503 PRINTS Tyrosine kinase catalytic domain signature 372 390 IPR001245 GO:0004672|GO:0006468
Cpe13g00675 503 Pfam Protein tyrosine and serine/threonine kinase 293 490 IPR001245 GO:0004672|GO:0006468
Cpe13g00675 503 ProSiteProfiles Protein kinase domain profile. 234 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe13g00675 503 SUPERFAMILY Protein kinase-like (PK-like) 296 495 IPR011009 -
Cpe13g00675 503 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 291 501 - -
Cpe13g00675 503 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 289 - -
Cpe13g00675 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Cpe13g00675 503 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 289 - -
Cpe13g00675 503 CDD STKc_MAP3K-like 291 487 - -
Cpe13g00675 503 ProSiteProfiles ACT domain profile. 192 266 IPR002912 -
Cpe13g00675 503 Gene3D Transferase(Phosphotransferase) domain 1 270 502 - -
Cpe13g00675 503 SUPERFAMILY ACT-like 191 260 IPR045865 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02111 Cpe13g00675 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00053 Cpe-Chr2:277513 Cpe13g00675 Cpe-Chr13:6349189 2.09E-85 dispersed
Cpe13g00675 Cpe-Chr13:6349189 Cpe14g01045 Cpe-Chr14:8766023 4.13E-124 dispersed
Cpe01g02111 Cpe-Chr1:17859216 Cpe13g00675 Cpe-Chr13:6349189 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62796 PF07714 PK_Tyr_Ser-Thr 2.30E-51 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe13g00675 - - mcha:111011813 885.945