Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00102 ATGAAAGATATAATCTTCCTGCAAATGGGCACTGCCGAGGAGACTGTACAACACCTGCAATTCGATGTTGAAGACACTATCTTTGTTGCAGTGGGAACCGACGCCGACGACGCCAAAGCTACTCTCCTTTGGGCTGTCCAGAACTTTGCCTGCAAGACTTTTTGTCTGCTTCATGTTCATCAGCTTACCCCTCGAGCTACTTCTCCGAAACATGAAGATCCATCTTCCCATACACTAAAAGAACATGTAGCGAAGGCATTTGAGGACCTCCAAAGGCAAAAGTCTTTTGAACTTCTTAATCAATATGTTCTCATTCTTGCCAAACTGGGGGTACGAGCGCAAAAGATATTGATTGCGACGAACAGTGTCGAGAGGGGGATTGTTGAAATTATTGATCAGTACAGTATTAAATGGCTAGTCATGGGTTTAGATGCAGAAAGATACAATCTGAAGGAGGGTGGACCGGGAAGATTCAATAAGTTGCAGCTGCAGAACACGGAAATAGGAATCAACCATACAAACCATCTGAGACCAGAATCTGTGACTTGTAAATTGAATCTTCTAGATGCTCAAGAACAGGAGAATGCATTTGATAGCATAAGCAGGTTTATATATGAAGGTCAGACGGATCCAAAGTTCGAAAACCTGGGTACTTCAAGGACGACGCTATTGTTAAAGAACGAGGTGAGTGGTTTGCAAGAAGCAGCATCGATGAACGTTACGCCCATAAAAGAATTTGAAGGAGTGAAGGCTTGGATAGAGGAAGAAGCTGTAGATGCTGAATTCAAGGCTAAATCATTAGAAAGCTCGTGTGTGGAGGAGGTGAAGAGAAGAAATGAGATGGAAGAAATTTTAGCGAGTTCGAAAAAAGAAGTGGAAAGGATGAACAAAGAGCATGATAAGCTCTTGAAAGAACTGCACCGTGTCCACGAGCAGAAATCGTTACTTGAGAGAAAAGCGTCGGAGAGCCGGTGTGATGTGGAGGAGTTGGAGAAGAAGATGTTTGCAGCTGTTGACCTCTTAGTGAGCTTCAAGGAGAAACGAGATAAGTTGCAGATCGAGCAGGAAGATGCAACGAACGAGCTCCGAAAGCTGAAGAACATGGTTGAAAGGGAATCATCGTGTAATCGCCGTGCAGAAATGCCTACATTCTCCTTCATGGAGATAATTGAAGCAACGAGAAACTTTGACCCTTCCTGGAAGATTGGTGAGGGAAGACATGGCAGTGTTTATAAAGGCGTTCTTCGCCACATGGATGTCGCTCTAAAAATGTTTCCTTCGGTTAGGCATCCCAACCTGGTTTCAATTATTGGAGCATGTCCAGAATCCAGGTTAATAGTGTATGAGAATATGAAAAACAGCAGCTTGGAAGACCACCTTGCCTGCAAAAATCGACCACTTCCATGGCAGATACGGATTCGTGTTGCTGCTGATATCTGCTTGGCCCTTATATTTCTGCATTACAGCGAGCCCTGCATTGTCCATGGAGATATAAAGCCAAGCAAAATCCTACTTGATGCCAACTTTATAGCCAAACTAGCTGGAGACTGGCCACATGATCTAGCAGAACAGTTGGCTCTTGTGGCACTGCGGTGCTGCGAGAAGGAAAAGTCGAATCGGCCTGACCTCGTCTCGGAGTTGTGGAGTGTTTTGGAGCCAATGAGATCCATTGCCTCAGCCTCATGTTCAAGCTTGAAGAAACACTCTCGCGTGCCTGCCCATTTTGCTTGTCCCATATTTCAGGAAATTATGAAAGATCCACTCATTGCTGCTGATGGGTTCACATATGAAGCTGATGCAATAAGAGGATGGTTCGAAAGTGGGCACAACACTTCTCCGATGACAAATCTTAAAGTTGAGCACTGTAATCTTGTACCAAATTATGCTCTTTTGAATGCAATTCAAGAGTGGCAGCATCAGCTATGA 1926 44.34 MKDIIFLQMGTAEETVQHLQFDVEDTIFVAVGTDADDAKATLLWAVQNFACKTFCLLHVHQLTPRATSPKHEDPSSHTLKEHVAKAFEDLQRQKSFELLNQYVLILAKLGVRAQKILIATNSVERGIVEIIDQYSIKWLVMGLDAERYNLKEGGPGRFNKLQLQNTEIGINHTNHLRPESVTCKLNLLDAQEQENAFDSISRFIYEGQTDPKFENLGTSRTTLLLKNEVSGLQEAASMNVTPIKEFEGVKAWIEEEAVDAEFKAKSLESSCVEEVKRRNEMEEILASSKKEVERMNKEHDKLLKELHRVHEQKSLLERKASESRCDVEELEKKMFAAVDLLVSFKEKRDKLQIEQEDATNELRKLKNMVERESSCNRRAEMPTFSFMEIIEATRNFDPSWKIGEGRHGSVYKGVLRHMDVALKMFPSVRHPNLVSIIGACPESRLIVYENMKNSSLEDHLACKNRPLPWQIRIRVAADICLALIFLHYSEPCIVHGDIKPSKILLDANFIAKLAGDWPHDLAEQLALVALRCCEKEKSNRPDLVSELWSVLEPMRSIASASCSSLKKHSRVPAHFACPIFQEIMKDPLIAADGFTYEADAIRGWFESGHNTSPMTNLKVEHCNLVPNYALLNAIQEWQHQL 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 555543 560421 - Cp4.1LG14g06210.1 Cpe14g00102 480486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00102 641 SUPERFAMILY RING/U-box 569 640 - -
Cpe14g00102 641 CDD RING-Ubox_WDSUB1_like 575 616 - -
Cpe14g00102 641 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 142 - -
Cpe14g00102 641 Gene3D HUPs 13 144 IPR014729 -
Cpe14g00102 641 Coils Coil 278 333 - -
Cpe14g00102 641 PANTHER OS02G0152300 PROTEIN 514 639 - -
Cpe14g00102 641 PANTHER OS02G0152300 PROTEIN 20 513 - -
Cpe14g00102 641 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 570 641 IPR013083 -
Cpe14g00102 641 SUPERFAMILY Protein kinase-like (PK-like) 372 514 IPR011009 -
Cpe14g00102 641 ProSiteProfiles U-box domain profile. 570 641 IPR003613 GO:0004842|GO:0016567
Cpe14g00102 641 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 514 639 - -
Cpe14g00102 641 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 20 513 - -
Cpe14g00102 641 Pfam U-box domain 571 639 IPR003613 GO:0004842|GO:0016567
Cpe14g00102 641 Coils Coil 341 368 - -
Cpe14g00102 641 Pfam Protein tyrosine and serine/threonine kinase 422 514 IPR001245 GO:0004672|GO:0006468
Cpe14g00102 641 ProSitePatterns Protein kinases ATP-binding region signature. 402 423 IPR017441 GO:0005524
Cpe14g00102 641 ProSiteProfiles Protein kinase domain profile. 396 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00102 641 Gene3D Transferase(Phosphotransferase) domain 1 383 517 - -
Cpe14g00102 641 SMART Ubox_2 574 637 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00082 Cpe14g00102 CCT
Cpe13g00095 Cpe14g00102 CCT
Cpe13g00095 Cpe14g00102 ECH
Cpe09g00082 Cpe14g00102 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00102 Cpe-Chr14:555543 Cpe08g00548 Cpe-Chr8:3585977 2.43E-12 dispersed
Cpe14g00102 Cpe-Chr14:555543 Cpe03g01733 Cpe-Chr3:13138432 1.91E-15 wgd
Cpe14g00102 Cpe-Chr14:555543 Cpe09g00082 Cpe-Chr9:483132 8.93E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62818 PF07714 PK_Tyr_Ser-Thr 2.10E-10 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00102 - - csv:101211339 715.687