Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe14g00286 | ATGGCAATACATCGGTATGAACAAGCTGATGATGAAGGCCAAACCCATTTGTTTCCGCTAGATTCTTTGTTCTGTGAGGAGAAATGGGGGGAGGAGGAGGAAGATAAGGCTGAGGTAGAACATACCCATCAGACCCATCTTTTTTCTTTGGGATTTTTGGAGGAAGATCTCTCTGGGGAAGATGAACGGCTTCTCTCCATGTTGTCTAAGGAAACAGAGCAGCTGAAACAGAGCAATCTCGAGCTTGAAGTTCTGTTGAAGGATCCTTCTGTCTCTGCTGCTCGTTCTTCAGCTGTGGAGTGGATACTCAAAGTCCAATCCCATTATGGGTTCTCAACTCTCACTGCCATTTTGGCCGTTGCTTATTTCGACAGGTTCCTCTTGAGCCTCCATTTTAAGAGTGACAAGCCGTGGATGAGCCAGCTTGTGGCTGTCACTTGCCTCTCCTTGGCGAGTAAAGTGGAGGAGATTGAAGTTCCACTTCTGCTGGACCTTCAAGTAGAGGATGCCAAATATGTGTTTGAGGCCAAAACCATTCAGAGAATGGAGCTTCTAGTGCTCTCAACTCTTCAATGGAGAATGCATTTGGTGACTCCATATTCTTTTCTTGATCACATTGTAAGGAGGCTTGGGTTAAAGTCCAATCTTCACTTAGAGTTCTTCAGGCGTTCTGAGCATCTTCTCATCTCTCAACTCTCAGATTCAAGATTTGTTGGTTATCTTCCATCTATCTTGGCAACTGCAACAATGATGGGAGTGATAGATCAGATTGAGCCCCATATGTCATTGGAGCGCCGAGATCAGCTTCTGGGTGTCCTCAAAATTGACAAGGAGAAAGTGCAATGCTGTTACAATCTTGTCAAGGAGCATTCTAAGGCCTATGGCAATGGCAATGGCATTTATCATCCCAACACCCCCCACAAGCGCAAGCATGAACAGCAAGCTCCTGATAGCCCAAGTGGTGTAATCGATGCTGGTTTCACTTCAGACAGCTCCGATGATTCTTGGGCTTTGAAAGCAGCATCAGTCTGTTCATCACCTGAACCTTCTTTCAAGAAGAGCAAAACCGAAGAGCCAAAGATGAAGTTTCATTCTCTTAACAGGCCATTTCTGGACATCGTTGGCAGCCCTTCTTGA | 1137 | 45.65 | MAIHRYEQADDEGQTHLFPLDSLFCEEKWGEEEEDKAEVEHTHQTHLFSLGFLEEDLSGEDERLLSMLSKETEQLKQSNLELEVLLKDPSVSAARSSAVEWILKVQSHYGFSTLTAILAVAYFDRFLLSLHFKSDKPWMSQLVAVTCLSLASKVEEIEVPLLLDLQVEDAKYVFEAKTIQRMELLVLSTLQWRMHLVTPYSFLDHIVRRLGLKSNLHLEFFRRSEHLLISQLSDSRFVGYLPSILATATMMGVIDQIEPHMSLERRDQLLGVLKIDKEKVQCCYNLVKEHSKAYGNGNGIYHPNTPHKRKHEQQAPDSPSGVIDAGFTSDSSDDSWALKAASVCSSPEPSFKKSKTEEPKMKFHSLNRPFLDIVGSPS | 378 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 1670885 | 1675313 | - | Cp4.1LG14g04220.1 | Cpe14g00286 | 480670 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe14g00286 | 378 | Coils | Coil | 68 | 88 | - | - | |
| Cpe14g00286 | 378 | Pfam | Cyclin, C-terminal domain | 197 | 296 | IPR004367 | - | |
| Cpe14g00286 | 378 | PANTHER | CYCLIN-D3-2 | 14 | 361 | - | - | |
| Cpe14g00286 | 378 | SMART | cyclin_7 | 100 | 188 | IPR013763 | - | |
| Cpe14g00286 | 378 | MobiDBLite | consensus disorder prediction | 296 | 333 | - | - | |
| Cpe14g00286 | 378 | ProSitePatterns | Cyclins signature. | 95 | 126 | IPR006671 | - | |
| Cpe14g00286 | 378 | Gene3D | - | 77 | 195 | - | - | |
| Cpe14g00286 | 378 | PANTHER | CYCLINS | 14 | 361 | IPR039361 | - | |
| Cpe14g00286 | 378 | SMART | Cyclin_C_2 | 197 | 316 | IPR004367 | - | |
| Cpe14g00286 | 378 | Pfam | Cyclin, N-terminal domain | 75 | 194 | IPR006671 | - | |
| Cpe14g00286 | 378 | Gene3D | - | 66 | 285 | - | - | |
| Cpe14g00286 | 378 | SUPERFAMILY | Cyclin-like | 61 | 195 | IPR036915 | - | |
| Cpe14g00286 | 378 | CDD | CYCLIN | 95 | 187 | IPR013763 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g00298 | Cpe14g00286 | CCT | |
| Cpe14g00286 | Cpe15g00473 | CCT | |
| Cpe14g00286 | Cpe15g00473 | ECH | |
| Cpe04g00298 | Cpe14g00286 | ECH | |
| Cpe01g00427 | Cpe14g00286 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00298 | Cpe-Chr4:3757790 | Cpe14g00286 | Cpe-Chr14:1670885 | 6.83E-89 | dispersed | |
| Cpe06g00180 | Cpe-Chr6:976067 | Cpe14g00286 | Cpe-Chr14:1670885 | 3.83E-88 | dispersed | |
| Cpe07g00498 | Cpe-Chr7:3257734 | Cpe14g00286 | Cpe-Chr14:1670885 | 2.75E-97 | dispersed | |
| Cpe14g00286 | Cpe-Chr14:1670885 | Cpe15g00473 | Cpe-Chr15:5737985 | 8.86E-89 | dispersed | |
| Cpe01g00427 | Cpe-Chr1:2468894 | Cpe14g00286 | Cpe-Chr14:1670885 | 0 | wgd | |
| Cpe11g00137 | Cpe-Chr11:738016 | Cpe14g00286 | Cpe-Chr14:1670885 | 6.56E-102 | wgd | |
| Cpe14g00286 | Cpe-Chr14:1670885 | Cpe19g00642 | Cpe-Chr19:5181481 | 4.94E-86 | wgd | |
| Cpe14g00286 | Cpe-Chr14:1670885 | Cpe02g00199 | Cpe-Chr2:1031220 | 3.07E-64 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe14g00286 | K14505 | - | csv:101221213 | 644.425 |