Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00374 ATGGACTTGCCAATGAAGAGGCCTATTTCAGGTGATCGGAGAACCCAGTACAGAATAGAAGCTAGAAATCTTTGTTACAAAATAAGTGAAAGTTTTGATGGGTTGAATTGGTTCTGTGGTGGAGGCAGCTCAAAGAGAGTTCCAAAGTTCATCTTAAAGAATGTGAACTGTGAGGCAAGAGCAGGGGAGATTACTGCCATTGCTGGTCCTAGTGGGGCTGGCAAAACAACATTGCTAGAGATTCTTGGAGGGAACATACCTTTAAAGAAGATTTCAGGTCAAGTGCTTGTTAATGATCAGCATATGATTGAGAAAACGTTTCCAAGAATCTCGGGATACGTCACGCAGGACGATGCGCTTTTTCCTTTCCTCACAGTTGAAGAAACACTCATGTATAGTGCTCTGTTGAGGCTTGGTGGTGGGAGAAAAGAGGCTGAATCTAGAGTGAGGAAGCTAATGAAGGACCTTGGATTGGAACACGTAGCAGCGTCGAGAGTTGGAGATGGATCGAACCGAGGCATTTCAGGAGGCGAAATGCGTCGAGTTTCGATTGGAGTTGAATTGGTTCATGATCCAGCTGTGATTTTCATTGATGAACCTACTTCAGGGTTGGATTCTGTCTCGGCAGTTCATGTTATGTCAGTGCTTAGAAGAATGGTCATTAGCCAAGGTAAGACTGTTCTTATAACCATCCATCAACCCGGTTTTCGAATCATGGAACTCTTTGATCGTCTGATTCTTCTGTCGAGTGGAGTTGTGATGCATAATGGACCATTGGGTCATCTTGAGGAGAAGCTTAAGCTTGCTACTCATCAGATCCCTCACCATGTCAATGTTCTTGAATTCGCCATTGACGTGGTGGATAGCTTGGCTATGCATACTTCAGAAACTTTCAACAAACTCCATTACCAACAAAACCGGGTTGAGAATCAGACAATAAGAGCTCGACACATCGATACGAAGGACGAAGAATCCATTTCGTTCCAGAATTCTCGATCCACGGAAGTCGTAATACTAGGACAAAGGTTTTTCAGAAACACGTTTAGGACCAAACAACTCTTTGCTACAAGAGTCATTCAAGCCTTGGTGGCTGGATTAGTACTTGGGACCATATTCTTCAAGACCGGGAATAACAACGACAAAACTACGTTGCAAACCCGGCTCGGGTTCTTCGCCTTTAGTCTCACGTTCTTGCTGTCTTCAACGACAGAAGGCCTTCCAATCTTCTTGAGGGAGAGAATGATCCTAATGAGAGAGACATCAAGAGGTGCTTACAGAGTATCTTCCTATGTTCTAGCAAACACATTCATATTTCTCCCATTCCTTCTGATGGTCTCTCTACTCTTCGCAGCCAGTGTTTACTGGTTGGTTGGTTTGAAAAACGACATTTTCGGGTTCTTTTACTTCTCTCTAATCGTTTGGATGGTCGTTCTAATGTCGAATTCTTTCGTAGCATGTTTCAGTGCTCTTGTCCCAAATTTCATTACAGGAAACTCAGTAATATCAGGGCTAATGGGGTGTTTCTTTCTGTTTTCTGGTTACTTTATATCAAAGAAGAACATCCCCAAGTACTGGATTTTCATGCACTATTTGAGTCTTTTCAAGTACCCATTTGAGTGTTTCTTGATAAATGAGTATGGAGGAGATCCAGGGAAGGGAAGATGCATAGAGTCCAAACAAGGAGTATGTACAACATATGGAAAAGTGTTCTTAAGACAACAAGATATAAAAGAGTCACACAAATGGAGCAATTTGGCAGTAATGTTGGGATTCATTGTTGGGTACAGGATCCTGTCTTTTGTGATCTTGTGGTACAGATGTAACAGAACCAGAAGCTAG 1839 42.52 MDLPMKRPISGDRRTQYRIEARNLCYKISESFDGLNWFCGGGSSKRVPKFILKNVNCEARAGEITAIAGPSGAGKTTLLEILGGNIPLKKISGQVLVNDQHMIEKTFPRISGYVTQDDALFPFLTVEETLMYSALLRLGGGRKEAESRVRKLMKDLGLEHVAASRVGDGSNRGISGGEMRRVSIGVELVHDPAVIFIDEPTSGLDSVSAVHVMSVLRRMVISQGKTVLITIHQPGFRIMELFDRLILLSSGVVMHNGPLGHLEEKLKLATHQIPHHVNVLEFAIDVVDSLAMHTSETFNKLHYQQNRVENQTIRARHIDTKDEESISFQNSRSTEVVILGQRFFRNTFRTKQLFATRVIQALVAGLVLGTIFFKTGNNNDKTTLQTRLGFFAFSLTFLLSSTTEGLPIFLRERMILMRETSRGAYRVSSYVLANTFIFLPFLLMVSLLFAASVYWLVGLKNDIFGFFYFSLIVWMVVLMSNSFVACFSALVPNFITGNSVISGLMGCFFLFSGYFISKKNIPKYWIFMHYLSLFKYPFECFLINEYGGDPGKGRCIESKQGVCTTYGKVFLRQQDIKESHKWSNLAVMLGFIVGYRILSFVILWYRCNRTRS 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2291980 2293818 - Cp4.1LG14g03340.1 Cpe14g00374 480758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00374 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 1 604 - -
Cpe14g00374 612 SMART AAA_5 61 252 IPR003593 -
Cpe14g00374 612 Pfam ABC-2 type transporter 335 546 IPR013525 GO:0016020|GO:0140359
Cpe14g00374 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 268 IPR027417 -
Cpe14g00374 612 CDD ABCG_EPDR 31 257 - -
Cpe14g00374 612 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Cpe14g00374 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 604 - -
Cpe14g00374 612 Pfam ABC-2 type transporter 232 298 IPR043926 GO:0140359
Cpe14g00374 612 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Cpe14g00374 612 Gene3D - 12 284 IPR027417 -
Cpe14g00374 612 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 275 IPR003439 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00599 Cpe14g00374 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00145 Cpe-Chr3:733348 Cpe14g00374 Cpe-Chr14:2291980 1.01E-120 dispersed
Cpe13g00830 Cpe-Chr13:7364379 Cpe14g00374 Cpe-Chr14:2291980 1.26E-128 dispersed
Cpe14g00374 Cpe-Chr14:2291980 Cpe15g00841 Cpe-Chr15:8287223 0 dispersed
Cpe14g00374 Cpe-Chr14:2291980 Cpe14g00074 Cpe-Chr14:407677 3.18E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00374 K05681 - csv:101213419 1087.4