Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00442 CCCATTGCAGAGGGAGATGATCAATGGAGCTCTCTCAATGGAGCCTTCACAGCCGATGAAGAAGAAGCGACGTTCGTGGCTCAGCTCTTCGCACCGCCCGACCCTTTCATGGCTAACCTTCATGATCTTCATCAACCTCCTTGTGAACCAGCTTCTTGTTCAAGCTTTTATAGGGTTTCACAAGAGAGTAGTGAGTTCAGTGGTGGAAGTTATTGCAGCCAATTGTTGTTCTCTGGGTCTGAAAGTAATGATCATTATTATTATTGTAATCCAATGGATAATCATGATTTTAGCTTGGGAGAGCTTGGAAGCAATAACAATGGCGGATTCCATCTTGAAGATCATGAGGACTCCATGAATATAGAAGCTGTTGTGGGAGAAGAGGGCGGTAACCCACTTGATATCAATGCCAAGAAAAGATCAAGGGGATTTGGGGATTTACAGAAGAGGAGGAATGAGAAGTCAAAGAAAACTCAAAAGCTTATCACTGAAGAAGATGGTAACAATGCTGCGCATAACAGGCAAAGCACAAGCAGCTATTGCTCCGAAGACGAATCCAACGCCTCTCTCGAGCTAAACGGAGGAGTTAATAACTCGGGACCGAGTCCGAACAGGCCGACCAAATCCCGAGCCAGTAGAGGCTCAGCTACTGATCCGCAAAGCCTCTATGCAAGGAGAAGAAGAGAAAGAATCAATGAGAGCACAATGCTCGAGGAAGCTGTTCAATATGTGAAGTTTCTACAGCTCCAAATCAAGCTATTAAGCTCGGATGATTTATGGATGTATGCTCCGATCGCTTACAACGGAATGGATATCGGGCTTAATCCGACCCCGAACACACCGAAAGTGTTA 852 45.42 PIAEGDDQWSSLNGAFTADEEEATFVAQLFAPPDPFMANLHDLHQPPCEPASCSSFYRVSQESSEFSGGSYCSQLLFSGSESNDHYYYCNPMDNHDFSLGELGSNNNGGFHLEDHEDSMNIEAVVGEEGGNPLDINAKKRSRGFGDLQKRRNEKSKKTQKLITEEDGNNAAHNRQSTSSYCSEDESNASLELNGGVNNSGPSPNRPTKSRASRGSATDPQSLYARRRRERINESTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNPTPNTPKVL 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5543153 5546067 - Cp4.1LG15g04420.1 Cpe15g00442 481900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00442 284 MobiDBLite consensus disorder prediction 133 163 - -
Cpe15g00442 284 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 113 233 - -
Cpe15g00442 284 MobiDBLite consensus disorder prediction 128 227 - -
Cpe15g00442 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 234 276 - -
Cpe15g00442 284 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 234 276 - -
Cpe15g00442 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 215 264 IPR036638 GO:0046983
Cpe15g00442 284 MobiDBLite consensus disorder prediction 164 219 - -
Cpe15g00442 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 113 233 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00404 Cpe15g00442 CCT
Cpe14g00269 Cpe15g00442 CCT
Cpe14g00269 Cpe15g00442 ECH
Cpe01g00404 Cpe15g00442 ECH
Cpe04g00326 Cpe15g00442 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00404 Cpe-Chr1:2341237 Cpe15g00442 Cpe-Chr15:5543153 3.65E-42 dispersed
Cpe04g00326 Cpe-Chr4:4005182 Cpe15g00442 Cpe-Chr15:5543153 1.80E-96 dispersed
Cpe11g00124 Cpe-Chr11:681069 Cpe15g00442 Cpe-Chr15:5543153 1.14E-39 dispersed
Cpe14g00269 Cpe-Chr14:1556221 Cpe15g00442 Cpe-Chr15:5543153 2.33E-42 dispersed
Cpe15g00442 Cpe-Chr15:5543153 Cpe18g00556 Cpe-Chr18:6104913 9.95E-12 dispersed
Cpe15g00441 Cpe-Chr15:5540508 Cpe15g00442 Cpe-Chr15:5543153 9.27E-29 tandem
Cpe15g00442 Cpe-Chr15:5543153 Cpe07g00514 Cpe-Chr7:3391186 2.71E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00442 - - cmax:111471089 465.307