Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00667 ATGGGGTCTGGAATCCGCCAATGCCATATCATAATCCTACGGTCGTCCTCTTTCACTTTCATGCCGTCTTCTCTGGAGCAGATATTTCTGTTCATCAATGAAAAAGTTGAACCGGACAAATTCCATATGAGGGCTCATTGGAAGAAGTCCCAGATTAGTTCTGTTCTAAGTCTGTTGAATTCTGTGATTATTTGTTGTGTCTTCCGTACACGTGCAAGAGAGAAAGATCAGAAAATGGATGAGAAGAGTGAAACCAAAGAGCCATCAAGGTCTAATCTGTCATATCCTTCTCATCAAATCAGCCCTACAGAGAAGAGGACACCAATTGAAGTCTTTCAAGTGCCTGAAAGTTTAGGAAATGACCATTCCAAAGGAGTGAGTAATGCCACTCATGATCAGGTTGGGGCAAAATCAACCGACACTTCCCTTTGTCCTGCTGCCAGCATGAAAGTATCTAAAAAGTGGATGGCATTTGAAAGTGAAGACTTAGATATAACAAAGACATACACAAAGAGCTTCAGTGGTAGCTTTGGGTCATCTTTTACTGAACTTTTGGAAACAACCATGACAAAAAAGACTGCAGAGAAGAATAAGATCGGCGATTTATCGTCGTTGACGTATGTTATCTCAGATGCAACAAAACCGGATTGCCCCATCGTGTTTGCCAGTGATAGGTTCTTGGTTATGACTGGATATACATTGGAGGAGCTCATTGGAAGGAACTGCCGTTTTCTTCAAGGACCGGAGACGGATAAGAACGAAGTAGCAAAAATACGAGATGCAATCGGAAAGGGGAATAGCTACTGTGGCAAGCTCTTGAACTACAAGAAGAATGAATGCAGGTTGAAATTGGCAAAAACACAGAAGGTACGAAGAAAAAAAGAGAAGTCCATGAGGTCCATGTCCATGACAGAGGTACAAGCTGAGAAGGTAATTAGGTCCATTGAGGTCGAAGCTGCGAAAAGTCTAAGATCTTACGTTCAGTCGAAAAGGCATGATGCAGATAGAAAGCACGAAGAGCCAGAAACGACTGGTGTTGATTATGCTCTGCACAAGGCTGTGGATGATGAGAATACTAGCACAGCTGATAACCAAAAGGCTCGGTTCAAAGAAAGTGCTCTAGGATCTGCAGTCAAACGTGAAGAACAGACAGTTGTTGAGACGTCTGTTTTCAAGCTTAGGGACGGTGATCGTATCGCTACAAGAGAAAGGGACATACGTCAAGGAATTCAGTTGGCTACCACATTGGAACGAATTGAGAAGAAATTTTTTATCACGAACCCAAGGCTTCCTGATAATCCTATTATATTTGCATCTCATAGGTTTCTTCATTCCACAGAATACACGTGCGAAGAAGTTCTTGGGAGAAACTTTTGGTTTCTTCAGGGACTTGAAACAGATCAAGTAACTGTCTCAAAGATAAACGATGCAATTGAAGAACAAAGAGAAATCACTCTTCAGATAATCAACTATACAAAGAGTGGAAAAAAGTTTTTGAATTTGTTCCACTTACAACCCGTGTATGATCAAAAGAAGGGCGAGCTTCAATATTTCATTGGCGTGCTACTTCATCTAAAACGTTCGAAAGACCGGCTTTTAGATCGGATGAAGCATGAACGAACTAAGCTGGTCAAAGATATAGCAGAAAGTGTCGATAGGGCTGTTCGAGAACTTCCCGACGCCAACTTGAAACCAAGTAATTTCTGGGCAATCTACTGTCAGCCAGTCTTACCAAGGCCTCACAAGAAGTACAGTCCTTCCTGGATAGCCATACAAAAGATTACCAGTCATGGTGAAAAGATAGGACTCCATCATTTTAAGCCAATAAAACCTCTGGGTTTTGGAGACATTGGAAGGTTCTATGCTGCAGAAGTTGTGATTGCTTTAGAGTACCTTCACTGTTTAGGTATTGTCTACAGGGACCTAAAACCCGAAAACATTCTACTCCAAAAAGACGGACATATCGTCCTCACTGATTTCGATTTATCATTTAAGACGTCGAATATACAAACCACAAAATCTCCACCCCGGAAAAGGATTAAGGGATCTTGGCATAGATTGGTACCGACGTTCGTTGCTGAACCGATTGTACAACTGAATTCATTCGTAGGAACTGAAGAGTACATTGCTCCCGAGATCATTATGGGAGCTGGCCATAATAGTTCTATTGACTGGTGGACTCTTGGTATTTTGTTGTATGAAATGCTCTATGGTCGCACACCCTTCAAAGGCAAGAACAGGAAGAAAACCTTTTCCAATATTTTGTTCAAGGACTTAACCTTTCCCCTTAGTATTAAGGTGAGTCTTGCAGGAAAGCAGCTGATTGATGCACTACTACAGAGAGACCCTGCACGTCGTCTAGGATCAAGTACCGGTTCCAATGAAATCAAACGACATCCATTTTTCCGTCATATAAACTGGCCTAAGATACGAACAATGACTCCACCATCAACAGAAGTAGCCCTTCAGTTATTTGAGAGAGATCCAAAGGCTAATGATTTGCAGTGGGAAGATGGAGTGCTCAGTCACTCAATAGGCTCTGATATATTCTGA 2553 41.83 MGSGIRQCHIIILRSSSFTFMPSSLEQIFLFINEKVEPDKFHMRAHWKKSQISSVLSLLNSVIICCVFRTRAREKDQKMDEKSETKEPSRSNLSYPSHQISPTEKRTPIEVFQVPESLGNDHSKGVSNATHDQVGAKSTDTSLCPAASMKVSKKWMAFESEDLDITKTYTKSFSGSFGSSFTELLETTMTKKTAEKNKIGDLSSLTYVISDATKPDCPIVFASDRFLVMTGYTLEELIGRNCRFLQGPETDKNEVAKIRDAIGKGNSYCGKLLNYKKNECRLKLAKTQKVRRKKEKSMRSMSMTEVQAEKVIRSIEVEAAKSLRSYVQSKRHDADRKHEEPETTGVDYALHKAVDDENTSTADNQKARFKESALGSAVKREEQTVVETSVFKLRDGDRIATRERDIRQGIQLATTLERIEKKFFITNPRLPDNPIIFASHRFLHSTEYTCEEVLGRNFWFLQGLETDQVTVSKINDAIEEQREITLQIINYTKSGKKFLNLFHLQPVYDQKKGELQYFIGVLLHLKRSKDRLLDRMKHERTKLVKDIAESVDRAVRELPDANLKPSNFWAIYCQPVLPRPHKKYSPSWIAIQKITSHGEKIGLHHFKPIKPLGFGDIGRFYAAEVVIALEYLHCLGIVYRDLKPENILLQKDGHIVLTDFDLSFKTSNIQTTKSPPRKRIKGSWHRLVPTFVAEPIVQLNSFVGTEEYIAPEIIMGAGHNSSIDWWTLGILLYEMLYGRTPFKGKNRKKTFSNILFKDLTFPLSIKVSLAGKQLIDALLQRDPARRLGSSTGSNEIKRHPFFRHINWPKIRTMTPPSTEVALQLFERDPKANDLQWEDGVLSHSIGSDIF 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7292808 7306004 - Cp4.1LG15g06710.1 Cpe15g00667 482125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00667 850 ProSiteProfiles PAS repeat profile. 219 265 IPR000014 -
Cpe15g00667 850 MobiDBLite consensus disorder prediction 76 107 - -
Cpe15g00667 850 PANTHER BNAC03G12530D PROTEIN 205 278 - -
Cpe15g00667 850 PANTHER FLIPPASE KINASE 1-RELATED 616 849 - -
Cpe15g00667 850 Pfam PAS domain 213 279 IPR000014 -
Cpe15g00667 850 Pfam PAS domain 431 522 IPR000014 -
Cpe15g00667 850 MobiDBLite consensus disorder prediction 89 106 - -
Cpe15g00667 850 CDD PAS 219 268 IPR000014 -
Cpe15g00667 850 ProSiteProfiles Protein kinase domain profile. 448 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00667 850 Gene3D Transferase(Phosphotransferase) domain 1 619 816 - -
Cpe15g00667 850 SMART serkin_6 517 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00667 850 SUPERFAMILY PYP-like sensor domain (PAS domain) 213 279 IPR035965 -
Cpe15g00667 850 Gene3D PAS domain 397 558 - -
Cpe15g00667 850 Gene3D PAS domain 207 342 - -
Cpe15g00667 850 SUPERFAMILY Protein kinase-like (PK-like) 619 827 IPR011009 -
Cpe15g00667 850 Pfam Protein kinase domain 618 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00667 850 SUPERFAMILY PYP-like sensor domain (PAS domain) 424 521 IPR035965 -
Cpe15g00667 850 PANTHER BNAC03G12530D PROTEIN 292 618 - -
Cpe15g00667 850 CDD PAS 431 525 IPR000014 -
Cpe15g00667 850 PANTHER BNAC03G12530D PROTEIN 616 849 - -
Cpe15g00667 850 PANTHER FLIPPASE KINASE 1-RELATED 205 278 - -
Cpe15g00667 850 PANTHER FLIPPASE KINASE 1-RELATED 292 618 - -
Cpe15g00667 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01329 Cpe15g00667 CCT
Cpe15g00667 Cpe16g00373 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01442 Cpe-Chr1:8635003 Cpe15g00667 Cpe-Chr15:7292808 2.90E-18 dispersed
Cpe15g00667 Cpe-Chr15:7292808 Cpe16g00373 Cpe-Chr16:5385784 5.16E-16 dispersed
Cpe15g00667 Cpe-Chr15:7292808 Cpe05g01329 Cpe-Chr5:9339804 1.08E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62865 PF00069 Pkinase 2.30E-39 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00667 K20715 - csv:101213364 751.51