Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00900 ATGTCTATCCATAGTCCTCCCAAGCTCCTAATTTCACCTTCTCTTCTCCAATTCCAATCTTTCCATTGCCCATTTCCCTTCCATTTCCAGCAAAAAAATGGAATCAATAAACATTTCCATTTACACCGCCATCAGCGTCTCCTCCTTCTGCCTAGAGCTATTCGCGAATGGCAAGAATATGAAGAGGCAGTGAAGCGCAAGGACCTCGCTGAAGCTCTTAGGTTTCTCGAATCCCTTGGCAGAGAGAGCGCAATCGAACCCCCTAATGATTCGGCACTTTCTGATTCCGCCCCTTCCGCTCTCGGGAATCCGCGGTTGTCTGGCTGGGAGAGGGACTGGGAGGTACTAGACACTTGTTTGAATGCGGATGATATGAAGCTTGTTGCCAATGCTTATGGGTTTCTCAGGGATAGAGGATTTTTGCCCAATTTTGGAAAATGCAGGAACATTGTTTTGGAGGGTCCAAGAGATGTCACGCCCTCTGTATTGGAGTCTACAACTGGATTAGAAGGTGATTTGACAAATCTCTGCTTTCAGATGGATTTATTTTTCATATTCAACGTATCACTTAATTTTCTTTTTCTGGCCTCCTCTGCTATTCCAGTGTTCAAATTGTCTCCAAAGAAGTGGGGTCTTTCAGGCAGCTCTCGTTATGCTTTGATTGCTTGTCTTGGTGGAACATCATTCCTGCTCTCCCAGGACATAGATATAAGGCCAAACCTTTTCGCACTGTTGGGGCTAGCGTTTTTGGATTCTATCCTCCTTGGTGGTACTTGTCTAGCGCAAATCTCAAGCTGTTGGCCACCATATAGGCGTCGAATCCTTGTACATGAAGCTGGACATCTACTGACTGTTCATGCAATTATGCAAGCACAACTCCTGAATGTTGATAAAAGTTCCTTGTACCCTATTGCAGCTTACCTCATGGGCTGCCCAATTCGTGGAGTGATTTTAGATCCGATTGTTGCTATGCAAATGGGGATACAAGGACAGGCAGGTACCCAGTTTTGGGATGAAAAAATGGCAAGCAACCTTGCTGAAGGACGATTGGATGGTACTTCCTTTGACAGGTACTGCATGGTTCTTTTTGCGGGCATTGCAGCTGAAGCTCTTGTTTACGGGGAAGCAGAGGGTGGAGAGAATGATGAAAATTTGTTTAGAAGTATCTGCGTTCTTTTGCAACCCCCATTGTCTGTTGCGCAGATGTCAAATCAAGCAAGATGGGCTGTTCTACAATCTTACAATCTGCTAAAGTGGCACAAACATGCACACCAAGTAGCAGTCAAAGCTTTGGAAAGTGGAAGCAGTCTCAGTGTTGTAATTAGAAGAATTGAGAATGCATTATCGACAAATAGATGA 1359 44.74 MSIHSPPKLLISPSLLQFQSFHCPFPFHFQQKNGINKHFHLHRHQRLLLLPRAIREWQEYEEAVKRKDLAEALRFLESLGRESAIEPPNDSALSDSAPSALGNPRLSGWERDWEVLDTCLNADDMKLVANAYGFLRDRGFLPNFGKCRNIVLEGPRDVTPSVLESTTGLEGDLTNLCFQMDLFFIFNVSLNFLFLASSAIPVFKLSPKKWGLSGSSRYALIACLGGTSFLLSQDIDIRPNLFALLGLAFLDSILLGGTCLAQISSCWPPYRRRILVHEAGHLLTVHAIMQAQLLNVDKSSLYPIAAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMASNLAEGRLDGTSFDRYCMVLFAGIAAEALVYGEAEGGENDENLFRSICVLLQPPLSVAQMSNQARWAVLQSYNLLKWHKHAHQVAVKALESGSSLSVVIRRIENALSTNR 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8663631 8667957 - Cp4.1LG15g08970.1 Cpe15g00900 482358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00900 452 SUPERFAMILY FtsH protease domain-like 268 437 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Cpe15g00900 452 PANTHER - 39 170 - -
Cpe15g00900 452 PANTHER - 196 451 - -
Cpe15g00900 452 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 39 170 - -
Cpe15g00900 452 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 196 451 - -
Cpe15g00900 452 Gene3D Peptidase M41 265 438 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00863 Cpe15g00900 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00134 Cpe-Chr4:1214884 Cpe15g00900 Cpe-Chr15:8663631 4.79E-17 transposed
Cpe16g00035 Cpe-Chr16:450020 Cpe15g00900 Cpe-Chr15:8663631 3.04E-15 transposed
Cpe15g00900 Cpe-Chr15:8663631 Cpe04g00863 Cpe-Chr4:7933630 1.45E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00900 - - csv:101213430 660.988