Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00265 ATGGCTACTTACTACTCGAGTTCGAATAACGAAAGGGATACTACTCCAATCCTCTATTCGAGGGGAGCTTTGCTCGGTTCGTATGAAGAAACAGCAGTTCTTCCACGGAATATGATGATGAATGCAAATTCTGGGACGTTCATGGATTCATTGCCTTCACAGGCGCAAAATGGTTGTAGTTCGATAACGCCTGTTGGAGCGGTTGGAACTGCCCAACAGCAGCAGGAGTTCTTAACGAATCTTGGTGGTTCGCGAATTTCTGACCATGATTTCAATACATGGAGAGAGGATCGGAGTGAAATGCTTGGTACGAATTCGATGTGTGTTTCGACCAATGTTGTTCGTGGTGGGCAGAATTTGCAGGGTCAGGGGTTGTCCCTTACTCTGAGTACACAAATCCCATCTGGAATCCAAATGGCTTCAATCCCCTACAGAGACTCGGATGTCGGTTTAGCTTCATTCCTGAGGCCTAATCCGACAAGCTCGGGTGAGGATGGCTGCAGAAATGGCGCTTCTCGAGATGAACAATTGAGAAATGGAGAAAACTTGGCCAAGGGTGAATTATCTCCTTACAGCATGTCTAGTATTGCAAGAACTATGCCTAATTCGAAGTACCTTAAGGCAGCACAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCGAATAATGAGAGAGATCCGAGTTCTCACGAGCGTGAAACTGGAACTGCCGAGAATGGTGATGCAGGAACTAAAAATGACACTTCGATGCAAACTGCAAGTGGAGTGTCTTCAAAACCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCACATGCTGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTATACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCATCAGATGCAGATAGTAGTGTCATCATTTGATGTGATTGCTGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGGGATGCCATAGCTGGTCAAGTCAGAGCTACTCGTAAAAGCCTAGGAGAGCACGAGAATTCTGGAAACGACAAAGGAGTTGGAATCACTCGTCTTAGATACGTGGACCAGCAGTTAAGGCAACAGAGAGCTCTTCAGCAGCTTGGCATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGATTGCCTGAAAACTCTGTTTCGATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTTGCAAGGCAGACGGGTTTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGCAGTGTGGACATGGACTCTATATCATCATCTGAAAATGCTAGCAAGGCAACAAAAGGAGATAACAAGACCTTCGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGTTCAACAGCGACCGAAAGATGTAGCACTGGAGATATCGTCGACTTAAAATCAGACCAAGTCTCTAATCTCGCAAACTCGGGTTCCAACAGACTAGCTAGTTTCCAAAATGGTGCTCATGTTGAAGCCGAAAACGAGCTGATAAAGCCGAATGAGGAGCTAAGGTCTAATGTAAATAACTCTAATTTCTTTCCTGATGCAATTGTCCAGTCTCAGGGAGAGAGTGACAGGTTTATGGCTGCTGCTGCCGCCGCCTATCACATGTCTGAATTGGGAAGGTTCGGGACGGTTGGCGGGGTATCACTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGTGGCATACCTATGCCTGCTGGGACACACCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAACGCTGCTGCTGCAGCGTCTTCTCTCGGGGAAACGGTGCATTTCGAATGCGTAAATGCTGCTGGGAATCCGCAACTGAGGTTCGGCCCTTCCCATCTTTATCACGATTTTGTTGTGTAA 2040 46.13 MATYYSSSNNERDTTPILYSRGALLGSYEETAVLPRNMMMNANSGTFMDSLPSQAQNGCSSITPVGAVGTAQQQQEFLTNLGGSRISDHDFNTWREDRSEMLGTNSMCVSTNVVRGGQNLQGQGLSLTLSTQIPSGIQMASIPYRDSDVGLASFLRPNPTSSGEDGCRNGASRDEQLRNGENLAKGELSPYSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERDPSSHERETGTAENGDAGTKNDTSMQTASGVSSKPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENASKATKGDNKTFEDDKEEDLQQSASSTATERCSTGDIVDLKSDQVSNLANSGSNRLASFQNGAHVEAENELIKPNEELRSNVNNSNFFPDAIVQSQGESDRFMAAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGGIPMPAGTHHGFAAMRGDDMYNAAAAASSLGETVHFECVNAAGNPQLRFGPSHLYHDFVV 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4649470 4654725 - Cp4.1LG16g02670.1 Cpe16g00265 482640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00265 679 MobiDBLite consensus disorder prediction 488 503 - -
Cpe16g00265 679 MobiDBLite consensus disorder prediction 244 279 - -
Cpe16g00265 679 SUPERFAMILY Homeodomain-like 400 467 IPR009057 -
Cpe16g00265 679 SMART prehox3 194 349 IPR006563 -
Cpe16g00265 679 MobiDBLite consensus disorder prediction 475 517 - -
Cpe16g00265 679 Gene3D - 394 472 - -
Cpe16g00265 679 ProSiteProfiles 'Homeobox' domain profile. 396 459 IPR001356 GO:0003677
Cpe16g00265 679 MobiDBLite consensus disorder prediction 155 186 - -
Cpe16g00265 679 SMART HOX_1 399 463 IPR001356 GO:0003677
Cpe16g00265 679 Coils Coil 281 301 - -
Cpe16g00265 679 CDD homeodomain 399 460 IPR001356 GO:0003677
Cpe16g00265 679 Pfam Associated with HOX 201 348 IPR006563 -
Cpe16g00265 679 Pfam Homeobox KN domain 416 455 IPR008422 GO:0003677|GO:0006355
Cpe16g00265 679 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 95 631 - -
Cpe16g00265 679 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 95 631 - -
Cpe16g00265 679 MobiDBLite consensus disorder prediction 223 243 - -
Cpe16g00265 679 MobiDBLite consensus disorder prediction 223 280 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00629 Cpe16g00265 CCT
Cpe05g01281 Cpe16g00265 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00311 Cpe-Chr3:1597464 Cpe16g00265 Cpe-Chr16:4649470 7.90E-103 dispersed
Cpe08g00966 Cpe-Chr8:7581769 Cpe16g00265 Cpe-Chr16:4649470 8.91E-97 dispersed
Cpe12g00736 Cpe-Chr12:6825921 Cpe16g00265 Cpe-Chr16:4649470 2.05E-103 dispersed
Cpe16g00265 Cpe-Chr16:4649470 Cpe17g00578 Cpe-Chr17:4719166 5.04E-102 dispersed
Cpe16g00823 Cpe-Chr16:7935654 Cpe16g00265 Cpe-Chr16:4649470 3.25E-54 dispersed
Cpe16g00265 Cpe-Chr16:4649470 Cpe05g01281 Cpe-Chr5:8935118 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50695 PF07526 POX 7.20E-51 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00265 - - csv:101205137 1166.37