Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00265 | ATGGCTACTTACTACTCGAGTTCGAATAACGAAAGGGATACTACTCCAATCCTCTATTCGAGGGGAGCTTTGCTCGGTTCGTATGAAGAAACAGCAGTTCTTCCACGGAATATGATGATGAATGCAAATTCTGGGACGTTCATGGATTCATTGCCTTCACAGGCGCAAAATGGTTGTAGTTCGATAACGCCTGTTGGAGCGGTTGGAACTGCCCAACAGCAGCAGGAGTTCTTAACGAATCTTGGTGGTTCGCGAATTTCTGACCATGATTTCAATACATGGAGAGAGGATCGGAGTGAAATGCTTGGTACGAATTCGATGTGTGTTTCGACCAATGTTGTTCGTGGTGGGCAGAATTTGCAGGGTCAGGGGTTGTCCCTTACTCTGAGTACACAAATCCCATCTGGAATCCAAATGGCTTCAATCCCCTACAGAGACTCGGATGTCGGTTTAGCTTCATTCCTGAGGCCTAATCCGACAAGCTCGGGTGAGGATGGCTGCAGAAATGGCGCTTCTCGAGATGAACAATTGAGAAATGGAGAAAACTTGGCCAAGGGTGAATTATCTCCTTACAGCATGTCTAGTATTGCAAGAACTATGCCTAATTCGAAGTACCTTAAGGCAGCACAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCGAATAATGAGAGAGATCCGAGTTCTCACGAGCGTGAAACTGGAACTGCCGAGAATGGTGATGCAGGAACTAAAAATGACACTTCGATGCAAACTGCAAGTGGAGTGTCTTCAAAACCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCACATGCTGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTATACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCATCAGATGCAGATAGTAGTGTCATCATTTGATGTGATTGCTGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGGGATGCCATAGCTGGTCAAGTCAGAGCTACTCGTAAAAGCCTAGGAGAGCACGAGAATTCTGGAAACGACAAAGGAGTTGGAATCACTCGTCTTAGATACGTGGACCAGCAGTTAAGGCAACAGAGAGCTCTTCAGCAGCTTGGCATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGATTGCCTGAAAACTCTGTTTCGATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTTGCAAGGCAGACGGGTTTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGCAGTGTGGACATGGACTCTATATCATCATCTGAAAATGCTAGCAAGGCAACAAAAGGAGATAACAAGACCTTCGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGTTCAACAGCGACCGAAAGATGTAGCACTGGAGATATCGTCGACTTAAAATCAGACCAAGTCTCTAATCTCGCAAACTCGGGTTCCAACAGACTAGCTAGTTTCCAAAATGGTGCTCATGTTGAAGCCGAAAACGAGCTGATAAAGCCGAATGAGGAGCTAAGGTCTAATGTAAATAACTCTAATTTCTTTCCTGATGCAATTGTCCAGTCTCAGGGAGAGAGTGACAGGTTTATGGCTGCTGCTGCCGCCGCCTATCACATGTCTGAATTGGGAAGGTTCGGGACGGTTGGCGGGGTATCACTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGTGGCATACCTATGCCTGCTGGGACACACCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAACGCTGCTGCTGCAGCGTCTTCTCTCGGGGAAACGGTGCATTTCGAATGCGTAAATGCTGCTGGGAATCCGCAACTGAGGTTCGGCCCTTCCCATCTTTATCACGATTTTGTTGTGTAA | 2040 | 46.13 | MATYYSSSNNERDTTPILYSRGALLGSYEETAVLPRNMMMNANSGTFMDSLPSQAQNGCSSITPVGAVGTAQQQQEFLTNLGGSRISDHDFNTWREDRSEMLGTNSMCVSTNVVRGGQNLQGQGLSLTLSTQIPSGIQMASIPYRDSDVGLASFLRPNPTSSGEDGCRNGASRDEQLRNGENLAKGELSPYSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERDPSSHERETGTAENGDAGTKNDTSMQTASGVSSKPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENASKATKGDNKTFEDDKEEDLQQSASSTATERCSTGDIVDLKSDQVSNLANSGSNRLASFQNGAHVEAENELIKPNEELRSNVNNSNFFPDAIVQSQGESDRFMAAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGGIPMPAGTHHGFAAMRGDDMYNAAAAASSLGETVHFECVNAAGNPQLRFGPSHLYHDFVV | 679 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 4649470 | 4654725 | - | Cp4.1LG16g02670.1 | Cpe16g00265 | 482640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 488 | 503 | - | - | |
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 244 | 279 | - | - | |
Cpe16g00265 | 679 | SUPERFAMILY | Homeodomain-like | 400 | 467 | IPR009057 | - | |
Cpe16g00265 | 679 | SMART | prehox3 | 194 | 349 | IPR006563 | - | |
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 475 | 517 | - | - | |
Cpe16g00265 | 679 | Gene3D | - | 394 | 472 | - | - | |
Cpe16g00265 | 679 | ProSiteProfiles | 'Homeobox' domain profile. | 396 | 459 | IPR001356 | GO:0003677 | |
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 155 | 186 | - | - | |
Cpe16g00265 | 679 | SMART | HOX_1 | 399 | 463 | IPR001356 | GO:0003677 | |
Cpe16g00265 | 679 | Coils | Coil | 281 | 301 | - | - | |
Cpe16g00265 | 679 | CDD | homeodomain | 399 | 460 | IPR001356 | GO:0003677 | |
Cpe16g00265 | 679 | Pfam | Associated with HOX | 201 | 348 | IPR006563 | - | |
Cpe16g00265 | 679 | Pfam | Homeobox KN domain | 416 | 455 | IPR008422 | GO:0003677|GO:0006355 | |
Cpe16g00265 | 679 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 10 | 95 | 631 | - | - | |
Cpe16g00265 | 679 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 95 | 631 | - | - | |
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 223 | 243 | - | - | |
Cpe16g00265 | 679 | MobiDBLite | consensus disorder prediction | 223 | 280 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00629 | Cpe16g00265 | CCT | |
Cpe05g01281 | Cpe16g00265 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00311 | Cpe-Chr3:1597464 | Cpe16g00265 | Cpe-Chr16:4649470 | 7.90E-103 | dispersed | |
Cpe08g00966 | Cpe-Chr8:7581769 | Cpe16g00265 | Cpe-Chr16:4649470 | 8.91E-97 | dispersed | |
Cpe12g00736 | Cpe-Chr12:6825921 | Cpe16g00265 | Cpe-Chr16:4649470 | 2.05E-103 | dispersed | |
Cpe16g00265 | Cpe-Chr16:4649470 | Cpe17g00578 | Cpe-Chr17:4719166 | 5.04E-102 | dispersed | |
Cpe16g00823 | Cpe-Chr16:7935654 | Cpe16g00265 | Cpe-Chr16:4649470 | 3.25E-54 | dispersed | |
Cpe16g00265 | Cpe-Chr16:4649470 | Cpe05g01281 | Cpe-Chr5:8935118 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50695 | PF07526 | POX | 7.20E-51 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00265 | - | - | csv:101205137 | 1166.37 |