Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00335 | ATGGATTTCTCTCTTAAGGCATTCAAATCCCACGGCTCTTATAAGTATGTGAGGAAGCTTTCTGGAACAGACTCTACTCAAGATCAAGAACAGCTTCCGATTCTTTCAGATCAGGAGCCGAATAATCTTCACCAGAAACGGTCGTTTATGGCGGTGTCCGATGCATCTGACAGGAAGGAGGTCATTGTCAAGGTCGATGAAGCCGATGCTTCGAGTAATGCATCTGCGAGAGCTGTGGAGTCGGTGAACTCCAGTGGGAGGATTTGGCGGGAGTCGAGCTATGATTTCTGGAATGATAGTGATAGTAAACGGAATAATGGTGAAGGTAGTAATGGCGATGGTGGTAAGGGTGAGGATTTTGAGTTTAGGCAACAGAGGAAGGATGTGGAAGATCCGCCTTCCAAGCTTATTGGACAGTTTCTGCATAAGCAGAAGGCGTCGGGAGAGATGTGTTTGGATATGGATATGGAAATGCTGGAACTACCACATGATAAGACTCTGCCTACGGTGGCAGAATCTCCGATGCGACGGAGTTCGAAAGAGTTGAAGGTCTCGTTTGAGTCTATTTCAGAGATTTCCGAAAGCGATTCGCTGCGAAGACGACATAGAGACTCGCCGGTCGATGAAGAACATAGAGTACAGCAACCGCCGCAGCGTGACCATCGACCGCATGGCAATGGTCATGATGACGGTGCTGCTGAGGTTGTGAGATGCACATCTAATTCATCGTTCGAGAGGAATGTATCGTTCCAGCGGAAATCTAGCTTGCTGAAGACTAAAACTAAGTCCAGATTGCTGGACCCGCCCGAACACCAGGACAGGAGGTCAGGGCGTGTACCAAAATCAGGGCAAATCCGCTCTGGTTTATTGTCAAAAGCCTTGGATGAGGAAGATGATGATCCATTCTTGGAAGAGGATCTTCCTGATGAGTATAAGAAGGCTAATCTCGGTGTTCTAACTATGCTACAATGGGCGAGTTTGATTCTGATAATCGCGGCATTGATTTGCACTCTAACAATCCGTTACTGGAGGAGAAAGAAGCTATGGAAGCTTGAATTATGGAAATGGGAGGTTATGATTCTAGTTCTGATATGTGGAAGGCTGTTTTCTGGTTGGGGTATTAGGATAATCGTGTTCTTCATCGAGAGAAGCTTTCTACTGCGTAAGAGGGTTCTATACTTCGTTTATGGAGTCAGAAAGGCAGTCCAGAATTGTCTTTGGTTGGGTCTGGTTCTAATTGCTTGGAACTTTCTGTTTGATGACAAAGTTCAAAGAGAAGTAAAGAGCGATGCTCTTGAGTATGTGACCAAAGTCCTGATATGTCTGCTGGTAAGCACTTTGGTTTGGCTGGTGAAAACGCTGATAGTGAAGGTTCTGGCGTCTTCTTTCCATGTGAGTACATATTTCGATAGGATTCAGGATGCATTGTATAACCAATATGTGATCGAGACACTGTCAGGGCCGCCATTGATAGAGATTCAAAAGAGCAAGGAAGAAGAAGAGAAGCTTGCAGAAGAGGTTATGAAGTTACAGAATGCAGGGGCCACTATTCCTCCTGATCTAAGGGCATCTGCCTTTTCAAGTCCAGAGGGTGGAAGGGTAATAGGGAGTGGAGGGCTACAGAAAAGTCCCCGTGGAAGGAGTGCCAAGCTTTCTCGGGCGCTATCCAAGAAAGGGGATGAGGGTATAACTATTGATCACTTGCATAGGCTTAGTCCTAAGAATGTGTCTGCTTGGAATATGAAGAGGTTGATGAACATTGTCCGACATGGGGCGCTTTCAACTTTGGATGAACAGATAAAGGATTCAGCTCATGAGGATGAATCAACTACCCAGATCAAGAGTGAGTATGAGGCAAAAGTTGCTGCTAAGAGGATTTTTCAGAACGTGGCTTCGCAGGGTTCCAAATATATCTACCTAGAGGACTTGATGCGTTTCATGGTAGAAGATGAAGCTTCAAAAACCATGAGTCTATTTGAAGGAGCATCTGAGAGTAGGAAAATAAGCAAATCATCCTTGAAAAACTGGGTGGTCAATGCCTTTAGAGAACGGAGGGCACTAGCTTTGACACTGAACGATACCAAAACAGCTGTGAACAAACTTCACCGCATGGTGAATATTTTAGTTTCTGTCATTATTCTGGTAATTTGGCTACTGATTCTGGGTATAGCCACCAGCAAGTTTCTCCTATTTGTAACCTCTCAGCTTGTACTGGTCGCATTTGTATTTGGAAATACTTGCAAGACTGTTTTTGAAGCAATCATCTTCTTATTTGTGATGCATCCATTCGATGTTGGAGACCGATGCGAAATCGATGGCGTGCAGATGATTGTTGAAGAAATGAACATTTTGACGACCGTTTTTCTACGATTCGACAACCAGAAGATCATATTTCCGAATAGCGTTCTCGCAACGAAGGCCATCCACAACTACTACCGCAGTCCCGACATGGGTGACGCCGTAGAATTCTGTCTTCACATATCTACTCCACCTGAGAAAATTGCCATCATGAGACAGAGAATACTAGGTTTCATTGAAGGCAAGAAGGAGCACTGGTGTCCTGCGCCATTGATTATCCTAAAGGATGTAGAAGAATTGAATAGAATGAGAATAGCAATATGGCTTACTCACAGAATGAACCATCAAGACATGGGAGAGAGGTGGACTAGGAGAGCCTTCTTGGTTGAAGAACTGGTTAAAATTTTCCAAGAGCTCGACCTGCAATATCGTCTCCTACCGCTCAATATCAACGTCTGTTCCTTGCCTCCAGTGAACTCTACTAGGCTTCCAGCTACTTGGGGAGCCACTGCAAGTTGA | 2817 | 44.87 | MDFSLKAFKSHGSYKYVRKLSGTDSTQDQEQLPILSDQEPNNLHQKRSFMAVSDASDRKEVIVKVDEADASSNASARAVESVNSSGRIWRESSYDFWNDSDSKRNNGEGSNGDGGKGEDFEFRQQRKDVEDPPSKLIGQFLHKQKASGEMCLDMDMEMLELPHDKTLPTVAESPMRRSSKELKVSFESISEISESDSLRRRHRDSPVDEEHRVQQPPQRDHRPHGNGHDDGAAEVVRCTSNSSFERNVSFQRKSSLLKTKTKSRLLDPPEHQDRRSGRVPKSGQIRSGLLSKALDEEDDDPFLEEDLPDEYKKANLGVLTMLQWASLILIIAALICTLTIRYWRRKKLWKLELWKWEVMILVLICGRLFSGWGIRIIVFFIERSFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSDALEYVTKVLICLLVSTLVWLVKTLIVKVLASSFHVSTYFDRIQDALYNQYVIETLSGPPLIEIQKSKEEEEKLAEEVMKLQNAGATIPPDLRASAFSSPEGGRVIGSGGLQKSPRGRSAKLSRALSKKGDEGITIDHLHRLSPKNVSAWNMKRLMNIVRHGALSTLDEQIKDSAHEDESTTQIKSEYEAKVAAKRIFQNVASQGSKYIYLEDLMRFMVEDEASKTMSLFEGASESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNILVSVIILVIWLLILGIATSKFLLFVTSQLVLVAFVFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGVQMIVEEMNILTTVFLRFDNQKIIFPNSVLATKAIHNYYRSPDMGDAVEFCLHISTPPEKIAIMRQRILGFIEGKKEHWCPAPLIILKDVEELNRMRIAIWLTHRMNHQDMGERWTRRAFLVEELVKIFQELDLQYRLLPLNINVCSLPPVNSTRLPATWGATAS | 938 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 5154578 | 5159120 | - | Cp4.1LG16g03410.1 | Cpe16g00335 | 482710 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00335 | 938 | Gene3D | - | 762 | 811 | IPR023408 | - | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 263 | 280 | - | - | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 193 | 231 | - | - | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 99 | 137 | - | - | |
Cpe16g00335 | 938 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 5 | 170 | - | - | |
Cpe16g00335 | 938 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 200 | 936 | - | - | |
Cpe16g00335 | 938 | PIRSF | Memb_At2g17000 | 44 | 938 | IPR016688 | - | |
Cpe16g00335 | 938 | SUPERFAMILY | Sm-like ribonucleoproteins | 752 | 811 | IPR010920 | - | |
Cpe16g00335 | 938 | Coils | Coil | 493 | 513 | - | - | |
Cpe16g00335 | 938 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 200 | 936 | IPR016688 | - | |
Cpe16g00335 | 938 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 5 | 170 | IPR016688 | - | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 114 | 133 | - | - | |
Cpe16g00335 | 938 | Pfam | Mechanosensitive ion channel | 704 | 906 | IPR006685 | GO:0016020|GO:0055085 | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 259 | 284 | - | - | |
Cpe16g00335 | 938 | MobiDBLite | consensus disorder prediction | 166 | 232 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe16g00335 | Cpe-Chr16:5154578 | Cpe18g00332 | Cpe-Chr18:4787006 | 0 | dispersed | |
Cpe16g00335 | Cpe-Chr16:5154578 | Cpe04g00610 | Cpe-Chr4:6360754 | 0 | wgd | |
Cpe16g00335 | Cpe-Chr16:5154578 | Cpe06g00045 | Cpe-Chr6:232841 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00335 | K22048 | - | csv:101210264 | 1514.59 |