Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe20g00086 ATGCAGGGAGCTGAAGCTGTTGATCAAGGAGATTGTTCCACATTTACAGAAACTATGCCACACAGCTGCAAACGAGACCCATTGGTGGTTGACTTGCTTCCTGGTGCTCCTTATAACCAACAGGTAGCTAGGTGCTGCAAAGGTGGTGTCTTGACCTCCTGGGGTCAAGATCCTTCTTCTGCTGTCTCTGCCTTCCAATTCACTGTTGGTCACTCTGGTAATTCAAACAAAACACAACGTGGAACATGCCACAGGAAGGAATCAGATCTTGAAAGCGTTACGGGGTTGAATGCTCCATTGCTGCAGTGCACGACACATAACTGTCCCATTCAAGTCCACTGGCATGTCAAGGAAAACTACAAGGGGTATTGGCGGCTCAAGATAACCATCACCAATCTCAACTATCGACTTAACTATTCACAATGGACTCTGGTCGTGGAGCACCCAAATTTCAGCAACATAATGGAAGTTTATAGCTTTTCCTATAGGCCAATTGCCCCCTTCAGCTCTAACAACGGTACAGCTCTGTTCTATGGCTTGAAATCTGTGAATGATGTGCTGCTTGAAGCAGGGCCAAATGGAAACGTTCAGTCAGAGATGATTTTGCAGAAGGATTCAGCCTTTACGTTGGAACAAGGGTGGGCTTTCCCTCGAAAAGTGTACTTTGATGGAGATGAATGTGTGATGCCGCTGCCTGAATCCTTCCCCTTCCTACCCAACCTGGCTAATGCAAATCCAGTGCCATTGTCAGCGCTAGCTTGCATTTTGGTTGCCATCTTCCTTGCGCTGTTATCTTAG 798 46.87 MQGAEAVDQGDCSTFTETMPHSCKRDPLVVDLLPGAPYNQQVARCCKGGVLTSWGQDPSSAVSAFQFTVGHSGNSNKTQRGTCHRKESDLESVTGLNAPLLQCTTHNCPIQVHWHVKENYKGYWRLKITITNLNYRLNYSQWTLVVEHPNFSNIMEVYSFSYRPIAPFSSNNGTALFYGLKSVNDVLLEAGPNGNVQSEMILQKDSAFTLEQGWAFPRKVYFDGDECVMPLPESFPFLPNLANANPVPLSALACILVAIFLALLS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 461896 463428 - Cp4.1LG20g00910.1 Cpe20g00086 486715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe20g00086 265 PANTHER PROTEIN COBRA 1 80 IPR006918 GO:0010215|GO:0031225
Cpe20g00086 265 PANTHER COBRA-LIKE PROTEIN 1 80 - -
Cpe20g00086 265 PANTHER COBRA-LIKE PROTEIN 83 260 - -
Cpe20g00086 265 PIRSF COBRA 81 265 IPR006918 GO:0010215|GO:0031225
Cpe20g00086 265 PIRSF COBRA 1 86 IPR006918 GO:0010215|GO:0031225
Cpe20g00086 265 Pfam COBRA-like protein 1 78 IPR006918 GO:0010215|GO:0031225
Cpe20g00086 265 PANTHER PROTEIN COBRA 83 260 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00714 Cpe20g00086 CCT
Cpe18g00714 Cpe20g00086 ECH
Cpe04g01448 Cpe20g00086 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00714 Cpe-Chr18:7039262 Cpe20g00086 Cpe-Chr20:461896 1.96E-23 dispersed
Cpe18g00713 Cpe-Chr18:7036903 Cpe20g00086 Cpe-Chr20:461896 1.57E-30 wgd
Cpe02g01399 Cpe-Chr2:12223631 Cpe20g00086 Cpe-Chr20:461896 2.60E-29 wgd
Cpe20g00086 Cpe-Chr20:461896 Cpe03g00975 Cpe-Chr3:7848729 1.43E-30 wgd
Cpe20g00086 Cpe-Chr20:461896 Cpe04g01448 Cpe-Chr4:11568796 7.04E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe20g00086 - - brp:103847531 313.153