Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0284 ATGGCGGCCAGGCCCAACTCCGTTTCCTTCAGGGTTCCGTACAAGAACCTCCATGATGCAGAAGTGGAGATGGTGGCTGTCGATGAACACCAGCTCCACGGGATCGATCTCAATTCTCCTTCTTCTGATGGATGTCCCAATGGAAGCCAAGATAGTTCATCCTCAACGCCTCATGTTAGATCTACGCCCAATAGTTTGATTATCTTAGTTCTGAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCATTACAGCTTTCCTTACTAACTCCCTATATTCAGACGCTCGGAATTGAGCATGCATTTTCTTCCTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTCGGTATATGGAGTGACAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATACTAGGAGATACAAAGGAGCACTGCAGAGTATATAAGGGTACACGAACAAGGGCAGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGACCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTTGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTAAGTAATGCTTGCTGTGAAGCCTGTGGGAACCTTAAAGCTGCATTTCTTATTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCGATGAAGTTCCACTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCGCCTCTGTTGAATGGGAATGAACAAAATAGTCCTAATATTTTAAAACCAGAACTTAACAGTCGGAATGGGAGCAGTGTTGACTATGGCTATCAAGAAAATATTAATTTGAAAAATTCAAAACCAATAAGTGAGGAAAATCACAGCGAAGGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGACCAGTTTAAGACATTTACCGCCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGTTGGTTATCCTGGTTTCCCTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGACGAACAGGTTTATGATCAGGGTGTGAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATAGAGCCCATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGACGGGAACTACTATTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGGGGAAATTCAACAATAAAAAATGCTGCCTTGGCTGTTTTTGCTCTTCTTGGTTTTCCTCTCGCCATAACATATAGTGTCCCCTTCTCTTTGACAGCAGAATTGACTGCTGATTCTGGTGGTGGTCAAGGATTGGCAATAGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCCCTGGGAGCTGGGCCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTAGCCTCTATATGTGCGCTTGCGGCCGGAGTGGTCGCAGTTCTTAGATTGCCTAAGCAAACCAACAGTTCTTTCAAATCCACAGTGAAGGAAAAGATTCCTGGAGTTGCTCTTAGAAAGAAGGCTGAATTTCCAGTGCCCCACCAATACATCCGTGTACCTTATACCTTTATTTAA 1890 42.91 MAARPNSVSFRVPYKNLHDAEVEMVAVDEHQLHGIDLNSPSSDGCPNGSQDSSSSTPHVRSTPNSLIILVLSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSNACCEACGNLKAAFLIAVLFLTICTLVTIYFADEVPLTAVDQPPRLSDSAPLLNGNEQNSPNILKPELNSRNGSSVDYGYQENINLKNSKPISEENHSEGYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTDEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAMSNFIVFACMTGTTIISLISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASICALAAGVVAVLRLPKQTNSSFKSTVKEKIPGVALRKKAEFPVPHQYIRVPYTFI 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2227683 2233454 - CrPI670011_01g002840.1 Cre01g0284 487829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0284 629 Pfam Major Facilitator Superfamily 76 477 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre01g0284 629 FunFam Sucrose transport protein SUT5 376 596 - -
Cre01g0284 629 PANTHER SUGAR TRANSPORTER 65 586 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cre01g0284 629 SUPERFAMILY MFS general substrate transporter 54 591 IPR036259 -
Cre01g0284 629 FunFam Sucrose transporter SUC2 67 291 - -
Cre01g0284 629 MobiDBLite consensus disorder prediction 300 324 - -
Cre01g0284 629 Gene3D MFS general substrate transporter like domains 62 589 IPR036259 -
Cre01g0284 629 CDD MFS_SLC45_SUC 69 586 - -
Cre01g0284 629 MobiDBLite consensus disorder prediction 38 59 - -
Cre01g0284 629 MobiDBLite consensus disorder prediction 301 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0284 Cre-Chr1:2227683 Cre08g1137 Cre-Chr8:24580666 4.90E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0284 K15378 - csv:101205348 1128.62