Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre07g0681 ATGGTTTTTTCTTCTTCTCTCCCTTCTTATTTGGATCCTCCTAACTGGCAACCGTTGACGAATCACCAAACGGGAGGAAATGATACTGCAGAGGATTCTGGTCAAGTTTTACTACCTCCACCACCTGGGGGTGGGGGAGGTAGTGACGGTGGTGGTGTTGGAGGTGGTACTGGGTCGATTAGGCCGGTTTCGATGACTGATCGAGCCCGGTTGGCGAAGATTCCGCAGCCGGAGGCCGGCTTGAAATGCCCTAGATGTGAATCTACAAATACCAAATTTTGTTACTTCAATAACTATAATCTTTCTCAGCCTCGCCACTTTTGTAAGACTTGTCGTCGGTATTGGACACGTGGTGGTGCACTGAGGAATGTTCCGGTCGGTGGTGGTTGCCGGAGGAACAAGAGGACCAAATCCCGGAATCGGTCTAAGTCTCCGGTGGCCAGTGAACGGCAATTATTAGGTGGATCAGCTAATTCTTCTGCTGGGGTTTCACTTTCAACACAACCCCATTTGCCCTTTTTGTCTTCTTTACATAATTTCTCTAATTATGGCCTCAATTTGGGCATAATTCCGCCGCAAGCTCCTCCATCAAGCGGTGGCTCCACCACCGGAGGAGTGGATGTTCATGAATTTCAAGGTGACCATTGGAGATTACAACAACCACAACAATTCCCTCTCTTGGCTAATGATCAACAACCTAATTTGCTTTACACTTTCGAGCCACCGGAAGGCACCATGACTCGGTATAATCTTGGCGGGTTCTCTAGATTAGGGATTGAAAACGACATGGGAATGACGACGGAGGCCGGGGCGGTGAAGGTGGAGGAGAGTAAAGGAATGAACTTAGGGAAGAATTTTCAATTTTGGGTCGGTGGTGGTGGCGGAAGCGACGTTAATGCATGGAGCGGCGGTGGCGGCGATCTTCATGGCTTCTCTTCATCCTCCGCCAGCCACTTATTGAGACA 965 49.43 MVFSSSLPSYLDPPNWQPLTNHQTGGNDTAEDSGQVLLPPPPGGGGGSDGGGVGGGTGSIRPVSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKSRNRSKSPVASERQLLGGSANSSAGVSLSTQPHLPFLSSLHNFSNYGLNLGIIPPQAPPSSGGSTTGGVDVHEFQGDHWRLQQPQQFPLLANDQQPNLLYTFEPPEGTMTRYNLGGFSRLGIENDMGMTTEAGAVKVEESKGMNLGKNFQFWVGGGGGSDVNAWSGGGGDLHGFSSSSASHLLR 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4608318 4609495 - CrPI670011_07g006810.1 Cre07g0681 503262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre07g0681 321 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cre07g0681 321 MobiDBLite consensus disorder prediction 1 31 - -
Cre07g0681 321 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cre07g0681 321 Pfam Dof domain, zinc finger 81 135 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cre07g0681 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 69 156 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre07g0681 321 MobiDBLite consensus disorder prediction 125 161 - -
Cre07g0681 321 MobiDBLite consensus disorder prediction 1 62 - -
Cre07g0681 321 MobiDBLite consensus disorder prediction 145 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0474 Cre-Chr3:3153121 Cre07g0681 Cre-Chr7:4608318 7.80E-42 dispersed
Cre04g1924 Cre-Chr4:36786582 Cre07g0681 Cre-Chr7:4608318 4.10E-26 dispersed
Cre04g1925 Cre-Chr4:36794076 Cre07g0681 Cre-Chr7:4608318 2.10E-30 dispersed
Cre07g0681 Cre-Chr7:4608318 Cre07g1719 Cre-Chr7:32642272 4.20E-26 dispersed
Cre10g0921 Cre-Chr10:11163289 Cre07g0681 Cre-Chr7:4608318 1.70E-28 transposed
Cre01g0476 Cre-Chr1:4125629 Cre07g0681 Cre-Chr7:4608318 7.70E-45 wgd
Cre10g2214 Cre-Chr10:36623748 Cre07g0681 Cre-Chr7:4608318 3.30E-45 wgd
Cre02g2330 Cre-Chr2:36784936 Cre07g0681 Cre-Chr7:4608318 4.00E-43 wgd
Cre04g0923 Cre-Chr4:27900575 Cre07g0681 Cre-Chr7:4608318 3.10E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54001 PF02701 zf-Dof 4.40E-32 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre07g0681 - - - 0.0