Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1402 | ATGCAGAATCATCAACAAATGAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTTCTGAGCTTCATCAAAGATTTGTTGAGTCTGTCAATCATCTTGGTGGAGCAGATAAGGCCACCCCTAAGAGCTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCACTTACAGAAATACAGGTTGGGAAAAAGCCAGCAGTCTGAAACCAATGCCCAACTCAAGCTAGAAGAGATGCAGAGAAAAGGTGGGCATTTTGATGGAGAAGAAAACAAGGATAGAAGTCAAAATCATAACAAAACAGAGAGCATGAAGATATCCGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGATTACAAGAGCAAATAGAGGTACAAAGGCATTTACAACTGAGAATCGAAGCACAAGGAAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTCTCTCAATTGGCTTCAATGGTGAGTTCTGGTTGTCAGAGCTCTTCTTTATCAGAACTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTAGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGCAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAGGAAAAAGAACAGAGCAGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAATGCATAAAAGTGATGAGGAACACGAAGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGACGATAATACAAGTGGAATTGAATCACAGTTGATTGAGTTCCTTTAA | 891 | 40.07 | MQNHQQMNLVLSTDAKPRLKWTSELHQRFVESVNHLGGADKATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQSETNAQLKLEEMQRKGGHFDGEENKDRSQNHNKTESMKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEQAPITKKRKGKEKEKEKEQSSSVSEGDCKRLTMHKSDEEHEEFRMIDLNDSQFDDNTSGIESQLIEFL | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 18190733 | 18192081 | - | CrPI670011_11g014020.1 | Cre11g1402 | 513147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1402 | 296 | FunFam | Myb family transcription factor | 15 | 73 | - | - | |
Cre11g1402 | 296 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 3 | 277 | IPR046955 | GO:0003700(InterPro) | |
Cre11g1402 | 296 | MobiDBLite | consensus disorder prediction | 230 | 277 | - | - | |
Cre11g1402 | 296 | Pfam | Myb-like DNA-binding domain | 18 | 69 | IPR001005 | - | |
Cre11g1402 | 296 | SUPERFAMILY | Homeodomain-like | 15 | 71 | IPR009057 | - | |
Cre11g1402 | 296 | MobiDBLite | consensus disorder prediction | 218 | 284 | - | - | |
Cre11g1402 | 296 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 16 | 71 | IPR006447 | GO:0003677(InterPro) | |
Cre11g1402 | 296 | Gene3D | - | 15 | 73 | - | - | |
Cre11g1402 | 296 | MobiDBLite | consensus disorder prediction | 90 | 109 | - | - | |
Cre11g1402 | 296 | Pfam | MYB-CC type transfactor, LHEQLE motif | 112 | 159 | IPR025756 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g1479 | Cre-Chr10:28623454 | Cre11g1402 | Cre-Chr11:18190733 | 2.60E-38 | dispersed | |
Cre10g1808 | Cre-Chr10:32486563 | Cre11g1402 | Cre-Chr11:18190733 | 1.00E-19 | dispersed | |
Cre11g0755 | Cre-Chr11:4765142 | Cre11g1402 | Cre-Chr11:18190733 | 7.50E-09 | dispersed | |
Cre11g1402 | Cre-Chr11:18190733 | Cre11g2062 | Cre-Chr11:32419062 | 6.50E-13 | dispersed | |
Cre11g1402 | Cre-Chr11:18190733 | Cre02g2184 | Cre-Chr2:35487802 | 2.40E-28 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54689 | PF14379 | Myb_CC_LHEQLE | 1.60E-22 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1402 | - | - | - | 0.0 |